Unconventional RNA-binding proteins: an uncharted zone in RNA biology

FEBS Lett. 2018 Sep;592(17):2917-2931. doi: 10.1002/1873-3468.13161. Epub 2018 Jun 29.

Abstract

The RNA-binding proteins play essential roles in the post-transcriptional regulation of gene expression. While hundreds of RNA-binding proteins can be predicted computationally, the recent introduction of proteome-wide approaches has dramatically expanded the repertoire of proteins interacting with RNA. Besides canonical RNA-binding proteins that contain characteristic RNA-binding domains, many proteins that lack such domains but have other well-characterized cellular functions were identified; including metabolic enzymes, heat shock proteins, kinases, as well as transcription factors and chromatin-associated proteins. In the context of these recently published RNA-protein interactome datasets obtained from yeast, nematodes, flies, plants and mammalian cells, we discuss examples for seemingly evolutionary conserved 'unconventional' RNA-binding proteins that act in central carbon metabolism, stress response or regulation of transcription.

Keywords: RNA-binding protein; heat shock; metabolism; post-transcriptional gene regulation; transcription.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Animals
  • Binding Sites
  • Carbon / metabolism
  • Databases, Protein
  • Gene Expression Regulation
  • Humans
  • RNA Processing, Post-Transcriptional
  • RNA-Binding Proteins / chemistry*
  • RNA-Binding Proteins / metabolism*
  • Stress, Physiological

Substances

  • RNA-Binding Proteins
  • Carbon