Coupling bimolecular PARylation biosensors with genetic screens to identify PARylation targets

Nat Commun. 2018 May 22;9(1):2016. doi: 10.1038/s41467-018-04466-4.

Abstract

Poly (ADP-ribose)ylation is a dynamic protein modification that regulates multiple cellular processes. Here, we describe a system for identifying and characterizing PARylation events that exploits the ability of a PBZ (PAR-binding zinc finger) protein domain to bind PAR with high-affinity. By linking PBZ domains to bimolecular fluorescent complementation biosensors, we developed fluorescent PAR biosensors that allow the detection of temporal and spatial PARylation events in live cells. Exploiting transposon-mediated recombination, we integrate the PAR biosensor en masse into thousands of protein coding genes in living cells. Using these PAR-biosensor "tagged" cells in a genetic screen we carry out a large-scale identification of PARylation targets. This identifies CTIF (CBP80/CBP20-dependent translation initiation factor) as a novel PARylation target of the tankyrase enzymes in the centrosomal region of cells, which plays a role in the distribution of the centrosomal satellites.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biosensing Techniques*
  • Calcium-Binding Proteins / genetics
  • Calcium-Binding Proteins / metabolism
  • Cell Line, Tumor
  • Centrioles / metabolism
  • Centrioles / ultrastructure
  • Centrosome / metabolism
  • Centrosome / ultrastructure
  • DNA Transposable Elements
  • Epithelial Cells / cytology
  • Epithelial Cells / metabolism
  • Eukaryotic Initiation Factors / genetics
  • Eukaryotic Initiation Factors / metabolism*
  • Fluorescent Dyes / chemistry
  • Fluorescent Dyes / metabolism
  • Genetic Testing
  • HeLa Cells
  • Humans
  • Mitosis*
  • Poly ADP Ribosylation
  • Poly Adenosine Diphosphate Ribose / metabolism
  • Protein Processing, Post-Translational*
  • Recombination, Genetic
  • Signal Transduction
  • Tankyrases / genetics
  • Tankyrases / metabolism*

Substances

  • CETN3 protein, human
  • CTIF protein, human
  • Calcium-Binding Proteins
  • DNA Transposable Elements
  • Eukaryotic Initiation Factors
  • Fluorescent Dyes
  • Poly Adenosine Diphosphate Ribose
  • TNKS2 protein, human
  • Tankyrases