Organic Amendments, Beneficial Microbes, and Soil Microbiota: Toward a Unified Framework for Disease Suppression

Annu Rev Phytopathol. 2018 Aug 25:56:1-20. doi: 10.1146/annurev-phyto-080615-100046. Epub 2018 May 16.

Abstract

Organic amendments (OAs) and soilborne biocontrol agents or beneficial microbes (BMs) have been extensively studied and applied worldwide in most agriculturally important plant species. However, poor integration of research and technical approaches has limited the development of effective disease management practices based on the combination of these two bio-based strategies. Insights into the importance of the plant-associated microbiome for crop productivity, which can be modified or modulated by introducing OAs and/or BMs, are providing novel opportunities to achieve the goal of long-term disease control. This review discusses novel ways of functionally characterizing OAs and how they may be used to promote the effect of added biocontrol agents and/or beneficial soil microbiota to support natural suppressiveness of plant pathogens.

Keywords: 13C-CPMAS NMR; beneficial microbes; biocontrol; soil microbiota; soilborne pathogens.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Crop Production / methods*
  • Microbiota*
  • Organic Agriculture / methods*
  • Plant Diseases / microbiology
  • Plant Diseases / parasitology
  • Plant Diseases / prevention & control*
  • Plant Diseases / virology
  • Soil Microbiology*