The transcription factor prospero homeobox protein 1 is a direct target of SoxC proteins during developmental vertebrate neurogenesis

J Neurochem. 2018 Aug;146(3):251-268. doi: 10.1111/jnc.14456.

Abstract

The high-mobility-group domain containing SoxC transcription factors Sox4 and Sox11 are expressed and required in the vertebrate central nervous system in neuronal precursors and neuroblasts. To identify genes that are widely regulated by SoxC proteins during vertebrate neurogenesis we generated expression profiles from developing mouse brain and chicken neural tube with reduced SoxC expression and found the transcription factor prospero homeobox protein 1 (Prox1) strongly down-regulated under both conditions. This led us to hypothesize that Prox1 expression depends on SoxC proteins in the developing central nervous system of mouse and chicken. By combining luciferase reporter assays and over-expression in the chicken neural tube with in vivo and in vitro binding studies, we identify the Prox1 gene promoter and two upstream enhancers at -44 kb and -40 kb relative to the transcription start as regulatory regions that are bound and activated by SoxC proteins. This argues that Prox1 is a direct target gene of SoxC proteins during neurogenesis. Electroporations in the chicken neural tube furthermore show that Prox1 activates a subset of SoxC target genes, whereas it has no effects on others. We propose that the transcriptional control of Prox1 by SoxC proteins may ensure coupling of two types of transcription factors that are both required during early neurogenesis, but have at least in part distinct functions. Open Data: Materials are available on https://cos.io/our-services/open-science-badges/ https://osf.io/93n6m/.

Keywords: HMG; Prox1; Sox; Sry; neuroblasts; neurogenesis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Chick Embryo
  • Chromatin Immunoprecipitation
  • Computational Biology
  • Electrophoretic Mobility Shift Assay
  • Electroporation
  • Embryo, Mammalian
  • Gene Expression Regulation, Developmental / physiology*
  • Gene Ontology
  • Green Fluorescent Proteins / genetics
  • Green Fluorescent Proteins / metabolism
  • Homeodomain Proteins / genetics
  • Homeodomain Proteins / metabolism*
  • Mice
  • Mice, Inbred C57BL
  • Mice, Transgenic
  • Nerve Tissue Proteins / genetics
  • Nerve Tissue Proteins / metabolism
  • Neural Stem Cells / physiology*
  • Neural Tube / cytology
  • Neural Tube / metabolism
  • Neurogenesis / physiology*
  • POU Domain Factors / genetics
  • POU Domain Factors / metabolism
  • Prosencephalon / cytology*
  • Prosencephalon / embryology
  • Prosencephalon / growth & development
  • Prosencephalon / metabolism
  • SOXC Transcription Factors / genetics
  • SOXC Transcription Factors / metabolism*
  • Tubulin / metabolism
  • Tumor Suppressor Proteins / genetics
  • Tumor Suppressor Proteins / metabolism*

Substances

  • Homeodomain Proteins
  • Nerve Tissue Proteins
  • POU Domain Factors
  • SOXC Transcription Factors
  • Tubb3 protein, mouse
  • Tubulin
  • Tumor Suppressor Proteins
  • prospero-related homeobox 1 protein
  • Pou3f4 protein, mouse
  • Green Fluorescent Proteins