Molecular genetic classification in Prader-Willi syndrome: a multisite cohort study

J Med Genet. 2019 Mar;56(3):149-153. doi: 10.1136/jmedgenet-2018-105301. Epub 2018 May 5.

Abstract

Background: Prader-Willi syndrome (PWS) is due to errors in genomic imprinting. PWS is recognised as the most common known genetic cause of life-threatening obesity. This report summarises the frequency and further characterises the PWS molecular classes and maternal age effects.

Methods: High-resolution microarrays, comprehensive chromosome 15 genotyping and methylation-specific multiplex ligation probe amplification were used to describe and further characterise molecular classes of maternal disomy 15 (UPD15) considering maternal age.

Results: We summarised genetic data from 510 individuals with PWS and 303 (60%) had the 15q11-q13 deletion; 185 (36%) with UPD15 and 22 (4%) with imprinting defects. We further characterised UPD15 findings into subclasses based on the presence (size, location) or absence of loss of heterozygosity (LOH). Additionally, significantly older mothers (mean age=32.5 years vs 27.7 years) were found in the UPD15 group (n=145) compared with the deletion subtype (n=200).

Conclusions: We report on molecular classes in PWS using advanced genomic technology in the largest cohort to date. LOH patterns in UPD15 may impact the risk of having a second genetic condition if the mother carries a recessive mutant allele in the isodisomic region on chromosome 15. The risk of UPD15 may also increase with maternal age.

Keywords: PWS maternal disomy subclasses; Prader-Willi syndrome; maternal age effects; molecular genetic classification; pws deletion subtypes.

Publication types

  • Multicenter Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Child
  • Child, Preschool
  • Chromosome Deletion
  • Chromosomes, Human, Pair 15
  • Cohort Studies
  • DNA Copy Number Variations
  • Female
  • Genetic Association Studies* / methods
  • Genetic Markers
  • Genetic Predisposition to Disease*
  • Genetic Testing
  • Humans
  • Infant
  • Male
  • Middle Aged
  • Mutation
  • Polymorphism, Single Nucleotide
  • Prader-Willi Syndrome / diagnosis*
  • Prader-Willi Syndrome / genetics*
  • Young Adult

Substances

  • Genetic Markers