Characterization of truncated endo-β-1,4-glucanases from a compost metagenomic library and their saccharification potentials

Int J Biol Macromol. 2018 Aug:115:554-562. doi: 10.1016/j.ijbiomac.2018.04.102. Epub 2018 Apr 23.

Abstract

A gene encoding an endo-β-1,4-glucanase (Cel6H-f481) was cloned from a compost metagenomic library. The gene, cel6H-f481, was composed of 1446 bp to encode a fused protein of 481 amino acid residues (50,429 Da), i.e., 445 residues (Cel6H-445) from the metagenome, and 36 residues from the pUC19 vector at N-terminus. Cel6H-445 belonged to glycosyl hydrolase (GH) family 6 and showed 71% identity with Actinotalea fermentans endoglucanase with low coverage. Several active bands of truncated forms were observed by activity staining of the crude extract. Major truncated enzymes of 35 (Cel6H-p35) and 23 kDa (Cel6H-p23) were separated by HiTrap Q chromatography. The two enzymes had the same optimum temperature (50 °C) and pH (5.5), but Cel6H-p35 was more thermostable than Cel6H-p23 and other GH6 endoglucanases reported. Both enzymes efficiently hydrolyzed carboxymethyl-cellulose (CMC) and barley β-glucan, but hardly hydrolyzed other substrates tested. The Vmax of Cel6H-p35 for CMC was 1.4 times greater than that of Cel6H-p23. The addition of the crude enzymes to a commercial enzyme set increased the saccharification of pretreated rice straw powder by up to 30.9%. These results suggest the N-terminal region of Cel6H-p35 contributes to thermostability and specific activity, and that the enzymes might be a useful additive for saccharification.

Keywords: Compost metagenome; GH6 endoglucanase; Saccharification; Truncated enzymes.

MeSH terms

  • Actinomycetales / enzymology
  • Actinomycetales / genetics
  • Amino Acid Sequence
  • Cellulase / chemistry
  • Cellulase / genetics*
  • Cellulase / metabolism*
  • Cellulose / metabolism
  • Cloning, Molecular
  • Composting*
  • Hydrolysis
  • Kinetics
  • Metagenomics*
  • Phylogeny
  • Sequence Deletion*
  • Sugars / metabolism*

Substances

  • Sugars
  • Cellulose
  • Cellulase