Coupling between nucleotide excision repair and gene expression

RNA Biol. 2018;15(7):845-848. doi: 10.1080/15476286.2018.1464354. Epub 2018 May 17.

Abstract

Gene expression and DNA repair are fundamental processes for life. During the last decade, accumulating experimental evidence point towards different modes of coupling between these processes. Here we discuss the molecular mechanisms by which RNAPII-dependent transcription affects repair by the Nucleotide Excision Repair system (NER) and how NER activity, through the generation of single stranded DNA intermediates and activation of the DNA damage response kinase ATR, drives gene expression in a genotoxic scenario. Since NER-dependent repair is compromised in Xeroderma Pigmentosum (XP) patients, and having in mind that these patients present a high degree of clinical heterogeneity, we speculate that some of the clinical features of XP patients can be explained by misregulation of gene expression.

Keywords: Gene expression; Nucleotide Excision Repair; UV light; Xeroderma Pigmentosum.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Ataxia Telangiectasia Mutated Proteins / genetics
  • Ataxia Telangiectasia Mutated Proteins / metabolism
  • Cockayne Syndrome / enzymology
  • DNA Damage
  • DNA Helicases / genetics
  • DNA Repair / physiology*
  • DNA, Single-Stranded / metabolism*
  • Gene Expression / radiation effects*
  • Humans
  • Mutation
  • RNA Polymerase II / metabolism
  • Skin / radiation effects
  • Transcription, Genetic / physiology
  • Ultraviolet Rays / adverse effects
  • Xeroderma Pigmentosum / enzymology*

Substances

  • DNA, Single-Stranded
  • ATR protein, human
  • Ataxia Telangiectasia Mutated Proteins
  • RNA Polymerase II
  • DNA Helicases

Grants and funding

We acknowledge funding by the Agencia Nacional de Promoción Científica y Tecnológica from Argentina: PICT 2017–2020 (#201-0046) and the National Research Council of Argentina: CONICET PIP (#11220130100809CO).