Mix-and-match nanobiosensor design: Logical and spatial programming of biosensors using self-assembled DNA nanostructures

Wiley Interdiscip Rev Nanomed Nanobiotechnol. 2018 Nov;10(6):e1518. doi: 10.1002/wnan.1518. Epub 2018 Apr 6.

Abstract

The evergrowing need to understand and engineer biological and biochemical mechanisms has led to the emergence of the field of nanobiosensing. Structural DNA nanotechnology, encompassing methods such as DNA origami and single-stranded tiles, involves the base pairing-driven knitting of DNA into discrete one-, two-, and three-dimensional shapes at nanoscale. Such nanostructures enable a versatile design and fabrication of nanobiosensors. These systems benefit from DNA's programmability, inherent biocompatibility, and the ability to incorporate and organize functional materials such as proteins and metallic nanoparticles. In this review, we present a mix-and-match taxonomy and approach to designing nanobiosensors in which the choices of bioanalyte and transduction mechanism are fully independent of each other. We also highlight opportunities for greater complexity and programmability of these systems that are built using structural DNA nanotechnology. This article is categorized under: Implantable Materials and Surgical Technologies > Nanomaterials and Implants Diagnostic Tools > Biosensing Biology-Inspired Nanomaterials > Nucleic Acid-Based Structures Nanotechnology Approaches to Biology > Nanoscale Systems in Biology.

Keywords: DNA nanobiosensors; Structural DNA nanotechnology; bottom-up manufacturing; disease diagnosis; multi-analyte sensing; nucleic acid-based structures.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.
  • Review

MeSH terms

  • Aptamers, Nucleotide / chemistry
  • Biomechanical Phenomena
  • Biosensing Techniques / instrumentation
  • Biosensing Techniques / methods*
  • DNA / chemistry*
  • Electrochemical Techniques
  • Fluorescence
  • Ions / analysis
  • Nanostructures / chemistry*
  • Nanotechnology / trends
  • Nucleic Acid Conformation
  • Proteins / analysis
  • Surface Plasmon Resonance

Substances

  • Aptamers, Nucleotide
  • Ions
  • Proteins
  • DNA