Agromyces mangrovi sp. nov., a Novel Actinobacterium Isolated from Mangrove Soil

Curr Microbiol. 2018 Aug;75(8):1055-1061. doi: 10.1007/s00284-018-1476-2. Epub 2018 Apr 9.

Abstract

A novel, Gram-stain-positive, microaerophilic to aerobic, non-endospore-forming, no-motile and rod-shaped bacterium designated Q14T was isolated from mangrove soil samples collected on chengmai, Hainan province, China. Strain Q14T was able to grow at 10-40 °C (optimum 30 °C), pH 5.5-10.0 (optimum 6.5-8.0) and with 0.5-6% (w/v) NaCl (optimum 1%). The genomic DNA G+C content was 70.1%. The chemotaxonomic analysis showed that the predominant isoprenoid quinone was MK-12 and the major fatty acids were anteiso-C15:0, iso-C17:0 and anteiso-C17:0. The major polar lipids of strain Q14T were diphosphatidylglycerol, phosphatidylglycerol and one glycolipid. The strain Q14T contained 2,4-diaminobutylic acid (A2bu), alanine acid, glutamic acid and glycine in the peptidoglycans. The phylogenetic analysis and DNA-DNA hybridization, along with the phenotypic and chemotaxonomic characteristics, indicate that strain Q14T as a novel species of the genus Agromyces, for which the name Agromyces mangrovi sp. nov. is proposed. The type strain is Q14T (= MCCC 1K03191T = KCTC 39814T).

MeSH terms

  • Actinobacteria* / classification
  • Actinobacteria* / genetics
  • Actinobacteria* / isolation & purification
  • Bacterial Typing Techniques
  • Base Composition
  • Base Sequence
  • China
  • DNA, Bacterial / genetics
  • Fatty Acids / analysis
  • Nucleic Acid Hybridization
  • Peptidoglycan / analysis
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Soil Microbiology*
  • Wetlands

Substances

  • DNA, Bacterial
  • Fatty Acids
  • Peptidoglycan
  • RNA, Ribosomal, 16S