Distribution of rotavirus genotypes associated with acute diarrhoea in Zimbabwean children less than five years old before and after rotavirus vaccine introduction

Vaccine. 2018 Nov 12;36(47):7248-7255. doi: 10.1016/j.vaccine.2018.03.069. Epub 2018 Apr 5.

Abstract

Background: Sentinel surveillance for diarrhoea is important to monitor changes in rotavirus epidemiological trends and circulating genotypes among children under 5 years before and after vaccine introduction. The Zimbabwe Ministry of Health and Child Care introduced rotavirus vaccine in national immunization program in May 2014.

Methods: Active hospital-based surveillance for diarrhoea was conducted at 3 sentinel sites from 2008 to 2016. Children aged less than 5 years, who presented with acute gastroenteritis as a primary illness and who were admitted to a hospital ward or treated at the emergency unit, were enrolled and had a stool specimen collected and tested for rotavirus by enzyme immunoassay (EIA). Genotyping of positive stools was performed using reverse-transcription polymerase chain reaction and genotyping assays. Pre-vaccine introduction, 10% of all positive stool specimens were genotyped and all adequate positive stools were genotyped post-vaccine introduction.

Results: During the pre-vaccine period, a total of 6491 acute gastroenteritis stools were collected, of which 3016 (46%) tested positive for rotavirus and 312 (10%) of the rotavirus positive stools were genotyped. During the post-vaccine period, a total of 3750 acute gastroenteritis stools were collected, of which 937 (25%) tested positive for rotavirus and 784 (84%) were genotyped. During the pre-vaccine introduction the most frequent genotype was G9P[8] (21%) followed by G2P[4] (12%), G1P[8] (6%), G2P[6] (5%), G12P[6] (4%), G9P[6] (3%) and G8P[4] (3%). G1P[8] (30%) was most dominant two years after vaccine introduction followed by G9P[6] (20%), G2P[4] (15%), G9P[8] (11%) and G1P[6] (4%).

Conclusion: The decline in positivity rate is an indication of early vaccine impact. Diversity of circulating strains underscores the importance of continued monitoring and strain surveillance after vaccine introduction.

Keywords: Genotypes vaccine; Rotavirus; Surveillance; Zimbabwe.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acute Disease / epidemiology
  • Child, Preschool
  • Diarrhea / epidemiology
  • Diarrhea / prevention & control
  • Diarrhea / virology*
  • Feces / virology
  • Gastroenteritis / epidemiology
  • Gastroenteritis / prevention & control
  • Gastroenteritis / virology
  • Genotype*
  • Hospitalization / statistics & numerical data
  • Humans
  • Immunization Programs*
  • Immunoenzyme Techniques
  • Infant
  • Reverse Transcriptase Polymerase Chain Reaction
  • Rotavirus / genetics*
  • Rotavirus Infections / epidemiology
  • Rotavirus Infections / prevention & control*
  • Rotavirus Vaccines / therapeutic use*
  • Sentinel Surveillance
  • Vaccines, Attenuated / therapeutic use
  • Zimbabwe / epidemiology

Substances

  • RIX4414 vaccine
  • Rotavirus Vaccines
  • Vaccines, Attenuated

Supplementary concepts

  • Rotavirus G