Loss of ISWI Function in Drosophila Nuclear Bodies Drives Cytoplasmic Redistribution of Drosophila TDP-43

Int J Mol Sci. 2018 Apr 4;19(4):1082. doi: 10.3390/ijms19041082.

Abstract

Over the past decade, evidence has identified a link between protein aggregation, RNA biology, and a subset of degenerative diseases. An important feature of these disorders is the cytoplasmic or nuclear aggregation of RNA-binding proteins (RBPs). Redistribution of RBPs, such as the human TAR DNA-binding 43 protein (TDP-43) from the nucleus to cytoplasmic inclusions is a pathological feature of several diseases. Indeed, sporadic and familial forms of amyotrophic lateral sclerosis (ALS) and fronto-temporal lobar degeneration share as hallmarks ubiquitin-positive inclusions. Recently, the wide spectrum of neurodegenerative diseases characterized by RBPs functions' alteration and loss was collectively named proteinopathies. Here, we show that TBPH (TAR DNA-binding protein-43 homolog), the Drosophila ortholog of human TDP-43 TAR DNA-binding protein-43, interacts with the arcRNA hsrω and with hsrω-associated hnRNPs. Additionally, we found that the loss of the omega speckles remodeler ISWI (Imitation SWI) changes the TBPH sub-cellular localization to drive a TBPH cytoplasmic accumulation. Our results, hence, identify TBPH as a new component of omega speckles and highlight a role of chromatin remodelers in hnRNPs nuclear compartmentalization.

Keywords: Drosophila; dTDP-43; gene expression; gene regulation; hnRNPs; neurodegenerative diseases; nuclear body; omega speckles.

MeSH terms

  • Animals
  • Cell Nucleus / metabolism
  • Chromatin Assembly and Disassembly / genetics
  • Cytoplasm / metabolism
  • DNA-Binding Proteins / genetics*
  • DNA-Binding Proteins / metabolism*
  • Drosophila / physiology*
  • Drosophila Proteins / genetics*
  • Drosophila Proteins / metabolism*
  • Fluorescent Antibody Technique
  • Genetic Association Studies*
  • Heterogeneous-Nuclear Ribonucleoproteins / metabolism
  • Protein Binding
  • Protein Transport

Substances

  • DNA-Binding Proteins
  • Drosophila Proteins
  • Heterogeneous-Nuclear Ribonucleoproteins
  • TBPH protein, Drosophila