Optimization of mRNA untranslated regions for improved expression of therapeutic mRNA

RNA Biol. 2018;15(6):756-762. doi: 10.1080/15476286.2018.1450054. Epub 2018 Mar 26.

Abstract

mRNA based therapies hold great promise for the treatment of genetic diseases. However, this therapeutic approach suffers from multiple challenges including the short half-life of exogenously administered mRNA and subsequent protein production. Modulation of untranslated regions (UTR) represents one approach to enhance both mRNA stability and translation efficiency. The current studies describe and validate screening methods using a diverse set of 5'UTR and 3'UTR combinations for improved expression of the Arginase 1 (ARG1) protein, a potential therapeutic mRNA target. Data revealed a number of critical aspects which need to be considered when developing a screening approach for engineering mRNA improvements. First, plasmid-based screening methods do not correlate with protein expression driven by exogenously expressed mRNA. Second, improved ARG1 protein production was driven by increased translation and not improved mRNA stability. Finally, the 5' UTR appears to be the key driver in protein expression for exogenously delivered mRNA. From the testing of the combinatorial library, the 5'UTR for complement factor 3 (C3) and cytochrome p4502E1 (CYP2E1) showed the largest and most consistent increase in protein expression relative to a reference UTR. Collectively, these data provide important information for the development and optimization of therapeutic mRNAs.

Keywords: ARG1; UTR; mRNA; mRNA stabllity; mRNA translation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 3' Untranslated Regions*
  • 5' Untranslated Regions*
  • Arginase* / biosynthesis
  • Arginase* / genetics
  • Complement C3 / genetics*
  • Cytochrome P-450 CYP2E1 / genetics*
  • Protein Biosynthesis / genetics*

Substances

  • 3' Untranslated Regions
  • 5' Untranslated Regions
  • Complement C3
  • Cytochrome P-450 CYP2E1
  • ARG1 protein, human
  • Arginase

Grants and funding

Alexion Pharmaceuticals.