Genome Sequence Resource for the Oomycete Taro Pathogen Phytophthora colocasiae

Mol Plant Microbe Interact. 2018 Sep;31(9):903-905. doi: 10.1094/MPMI-12-17-0321-A. Epub 2018 Aug 3.

Abstract

Phytophthora colocasiae is a phytopathogenic oomycete that causes leaf blight and corm rot on taro (Colocasia esculenta), an important staple crop in the tropics. The impact of P. colocasiae is a serious concern for food security in Asian and Oceanic regions. Vietnamese strain 7290 of P. colocasiae was sequenced (Illumina) to assemble a draft genome of 56.6 Mb, comprised of 19,853 scaffolds and 19,984 predicted protein-coding genes. As in other Phytophthora species, P. colocasiae possesses numerous pathogenicity-related genes, such as the RxLR class of effectors. This draft genome sequence of P. colocasiae provides a resource to underpin the first steps in determining the molecular mechanisms of disease development in this pathosystem.

MeSH terms

  • Colocasia / parasitology*
  • Genome / genetics*
  • Phytophthora / genetics*
  • Phytophthora / pathogenicity
  • Plant Diseases / parasitology*