Structure-Based Virtual Screening, Compound Synthesis, and Bioassay for the Design of Chitinase Inhibitors

J Agric Food Chem. 2018 Apr 4;66(13):3351-3357. doi: 10.1021/acs.jafc.8b00017. Epub 2018 Mar 22.

Abstract

Chitinases play a vital part in the molting phase of insect pests. Inhibiting their activities by the use of drug-like small chemical molecules is thought to be an efficient strategy in pesticide design and development. On the basis of the crystal structure of OfChtI, a chitinase indispensable for the molting of the insect pest Ostrinia furnacalis (Asian corn borer), here we report a chemical fragment and five variant compounds as inhibitors of OfChtI obtained from a library of over 200 000 chemicals by a structure-based-virtual-screening approach. The compounds were synthesized with high atom economy and tested for their OfChtI-inhibitory activities in a bioassay. Compound 3 showed preferential inhibitory activity with a Ki value of 1.5 μΜ against OfChtI. Analysis of the structure-activity relationships of the compounds provided insight into their interactions with the enzyme active site, which may inform future work in improving the potencies of their inhibitory activities.

Keywords: chitinase; fragment; inhibitors; structure-based virtual screening; structure−activity relationship.

MeSH terms

  • Animals
  • Biological Assay
  • Catalytic Domain
  • Chitinases / antagonists & inhibitors*
  • Chitinases / chemistry
  • Drug Evaluation, Preclinical
  • Enzyme Inhibitors / chemistry*
  • Insect Proteins / antagonists & inhibitors*
  • Insect Proteins / chemistry
  • Kinetics
  • Moths / drug effects*
  • Moths / enzymology
  • Structure-Activity Relationship

Substances

  • Enzyme Inhibitors
  • Insect Proteins
  • Chitinases