A guide to large-scale RNA sample preparation

Anal Bioanal Chem. 2018 May;410(14):3239-3252. doi: 10.1007/s00216-018-0943-8. Epub 2018 Mar 15.

Abstract

RNA is becoming more important as an increasing number of functions, both regulatory and enzymatic, are being discovered on a daily basis. As the RNA boom has just begun, most techniques are still in development and changes occur frequently. To understand RNA functions, revealing the structure of RNA is of utmost importance, which requires sample preparation. We review the latest methods to produce and purify a variation of RNA molecules for different purposes with the main focus on structural biology and biophysics. We present a guide aimed at identifying the most suitable method for your RNA and your biological question and highlighting the advantages of different methods. Graphical abstract In this review we present different methods for large-scale production and purification of RNAs for structural and biophysical studies.

Keywords: Chemical synthesis; In vitro transcription; Preparative high-performance liquid chromatography; RNA; Sample preparation; Structural biology.

Publication types

  • Review

MeSH terms

  • Animals
  • Chromatography, Affinity / methods
  • Chromatography, Gel / methods
  • Chromatography, High Pressure Liquid / methods*
  • Chromatography, Ion Exchange / methods
  • Chromatography, Reverse-Phase / methods
  • Humans
  • RNA / chemistry
  • RNA / genetics
  • RNA / isolation & purification*
  • Transcription, Genetic

Substances

  • RNA, recombinant
  • RNA