Structure/Function Analysis of Cotton-Based Peptide-Cellulose Conjugates: Spatiotemporal/Kinetic Assessment of Protease Aerogels Compared to Nanocrystalline and Paper Cellulose

Int J Mol Sci. 2018 Mar 13;19(3):840. doi: 10.3390/ijms19030840.

Abstract

Nanocellulose has high specific surface area, hydration properties, and ease of derivatization to prepare protease sensors. A Human Neutrophil Elastase sensor designed with a nanocellulose aerogel transducer surface derived from cotton is compared with cotton filter paper, and nanocrystalline cellulose versions of the sensor. X-ray crystallography was employed along with Michaelis-Menten enzyme kinetics, and circular dichroism to contrast the structure/function relations of the peptide-cellulose conjugate conformation to enzyme/substrate binding and turnover rates. The nanocellulosic aerogel was found to have a cellulose II structure. The spatiotemporal relation of crystallite surface to peptide-cellulose conformation is discussed in light of observed enzyme kinetics. A higher substrate binding affinity (Km) of elastase was observed with the nanocellulose aerogel and nanocrystalline peptide-cellulose conjugates than with the solution-based elastase substrate. An increased Km observed for the nanocellulosic aerogel sensor yields a higher enzyme efficiency (kcat/Km), attributable to binding of the serine protease to the negatively charged cellulose surface. The effect of crystallite size and β-turn peptide conformation are related to the peptide-cellulose kinetics. Models demonstrating the orientation of cellulose to peptide O6-hydroxymethyl rotamers of the conjugates at the surface of the cellulose crystal suggest the relative accessibility of the peptide-cellulose conjugates for enzyme active site binding.

Keywords: aerogel; human neutrophil elastase; nanocellulose; peptide-cellulose conformation; protease sensor.

MeSH terms

  • Biocatalysis
  • Biosensing Techniques / methods*
  • Cellulose / analogs & derivatives*
  • Gels / chemistry
  • Gossypium / chemistry
  • Humans
  • Leukocyte Elastase / chemistry*
  • Leukocyte Elastase / metabolism
  • Nanoparticles / chemistry*
  • Peptides / chemistry
  • Protein Binding
  • Structure-Activity Relationship

Substances

  • Gels
  • Peptides
  • Cellulose
  • Leukocyte Elastase