Cell-Penetrating Function of the Poly(ADP-Ribose) (PAR)-Binding Motif Derived from the PAR-Dependent E3 Ubiquitin Ligase Iduna

Int J Mol Sci. 2018 Mar 8;19(3):779. doi: 10.3390/ijms19030779.

Abstract

Iduna is a poly(ADP-ribose) (PAR)-dependent E3 ubiquitin ligase that regulates cellular responses such as proteasomal degradation and DNA repair upon interaction with its substrate. We identified a highly cationic region within the PAR-binding motif of Iduna; the region was similar among various species and showed amino acid sequence similarity with that of known cell-penetrating peptides (CPPs). We hypothesized that this Iduna-derived cationic sequence-rich peptide (Iduna) could penetrate the cell membrane and deliver macromolecules into cells. To test this hypothesis, we generated recombinant Iduna-conjugated enhanced green fluorescent protein (Iduna-EGFP) and its tandem-repeat form (d-Iduna-EGFP). Both Iduna-EGFP and d-Iduna-EGFP efficiently penetrated Jurkat cells, with the fluorescence signals increasing dose- and time-dependently. Tandem-repeats of Iduna and other CPPs enhanced intracellular protein delivery efficiency. The delivery mechanism involves lipid-raft-mediated endocytosis following heparan sulfate interaction; d-Iduna-EGFP was localized in the nucleus as well as the cytoplasm, and its residence time was much longer than that of other controls such as TAT and Hph-1. Moreover, following intravenous administration to C57/BL6 mice, d-Iduna-EGFP was efficiently taken up by various tissues, including the liver, spleen, and intestine suggesting that the cell-penetrating function of the human Iduna-derived peptide can be utilized for experimental and therapeutic delivery of macromolecules.

Keywords: Iduna; PAR binding motif; cell-penetrating peptide.

MeSH terms

  • Animals
  • Binding Sites
  • Cell Membrane / metabolism
  • Endocytosis*
  • Green Fluorescent Proteins / genetics
  • Green Fluorescent Proteins / metabolism
  • HeLa Cells
  • Humans
  • Jurkat Cells
  • Mice
  • Mice, Inbred C57BL
  • Peptide Fragments / genetics*
  • Peptide Fragments / metabolism
  • Poly (ADP-Ribose) Polymerase-1 / metabolism*
  • Protein Binding
  • Protein Transport
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Recombinant Proteins / pharmacokinetics
  • Tissue Distribution
  • Ubiquitin-Protein Ligases / chemistry*

Substances

  • Peptide Fragments
  • Recombinant Proteins
  • Green Fluorescent Proteins
  • RNF146 protein, human
  • Ubiquitin-Protein Ligases
  • Poly (ADP-Ribose) Polymerase-1