Laminopathy-causing lamin A mutations reconfigure lamina-associated domains and local spatial chromatin conformation

Nucleus. 2018 Jan 1;9(1):216-226. doi: 10.1080/19491034.2018.1449498.

Abstract

The nuclear lamina contributes to the regulation of gene expression and to chromatin organization. Mutations in A-type nuclear lamins cause laminopathies, some of which are associated with a loss of heterochromatin at the nuclear periphery. Until recently however, little if any information has been provided on where and how lamin A interacts with the genome and on how disease-causing lamin A mutations may rearrange genome conformation. Here, we review aspects of nuclear lamin association with the genome. We highlight recent evidence of reorganization of lamin A-chromatin interactions in cellular models of laminopathies, and implications on the 3-dimensional rearrangement of chromatin in these models, including patient cells. We discuss how a hot-spot lipodystrophic lamin A mutation alters chromatin conformation and epigenetic patterns at an anti-adipogenic locus, and conclude with remarks on links between lamin A, Polycomb and the pathophysiology of laminopathies. The recent findings presented here collectively argue towards a deregulation of large-scale and local spatial genome organization by a subset of lamin A mutations causing laminopathies.

Keywords: 3D genome; LAD; chromatin; differentiation; genome conformation; lamin A/C.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Chromatin / chemistry*
  • Chromatin / genetics*
  • Chromatin / metabolism
  • Humans
  • Lamin Type A / genetics*
  • Lamin Type A / metabolism
  • Musculoskeletal Diseases / genetics*
  • Musculoskeletal Diseases / metabolism
  • Mutation*
  • Nuclear Lamina / chemistry*
  • Nuclear Lamina / genetics*
  • Nuclear Lamina / metabolism

Substances

  • Chromatin
  • Lamin Type A

Grants and funding

Our work is funded by South East Health Norway, the University of Oslo, the Research Council of Norway, The Norwegian Center for Stem Cell Research (P.C.), and EU Scientia Fellowship FP7-PEOPLE-2013-COFUND No. 609020 (N.B.).