Identification of Potential Therapeutic Targets Among CXC Chemokines in Breast Tumor Microenvironment Using Integrative Bioinformatics Analysis

Cell Physiol Biochem. 2018;45(5):1731-1746. doi: 10.1159/000487782. Epub 2018 Feb 23.

Abstract

Background/aims: Breast cancer is a common cause of cancer mortality throughout the world. The cross-talk between cancer cells and interstitial cells exerts significant effects on neoplasia and tumor development and is modulated in part by chemokines. CXC is one of four chemokine families involved in mediating survival, angiogenesis, and immunosensitization by chemoattracting leukocytes, and it incentivizes tumor cell growth, invasion and metastasis in the tumor microenvironment. However, the differential expression profiles and prognostic values of these chemokines remains to be elucidated.

Methods: In this study, we compared transcriptional CXC chemokines and survival data of patients with breast carcinoma (BC) using the ONCOMINE dataset, Kaplan-Meier Plotter, TCGA and cBioPortal.

Results: We discovered increased mRNA levels for CXCL8/10/11/16/17, whereas mRNA expression of CXCL1/2/3/4/5/6/7/12/14 was lower in BC patients compared to non-tumor tissues. Kaplan-Meier plots revealed that high mRNA levels of CXCL1/2/3/4/5/6/7/12/14 correlate with relapse-free survival (RFS) in all types of BC patients. Conversely, high CXCL8/10/11 predicted worse RFS in BC patients. Significantly, high transcription levels of CXCL9/12/13/14 conferred an overall survival (OS) advantage in BC patients, while high levels of CXCL8 demonstrated shorter OS in all BC sufferers.

Conclusions: Integrative bioinformatics analysis suggests that CXCL8/12/14 are potential suitable targets for precision therapy in BC patients compared to other CXC chemokines.

Keywords: Breast cancer; Chemokine; Prognosis; Tumor microenvironment.

MeSH terms

  • Breast Neoplasms / drug therapy
  • Breast Neoplasms / mortality
  • Breast Neoplasms / pathology
  • Chemokine CXCL9 / genetics
  • Chemokine CXCL9 / metabolism
  • Chemokines, CXC / antagonists & inhibitors
  • Chemokines, CXC / genetics
  • Chemokines, CXC / metabolism*
  • Computational Biology / methods*
  • Databases, Factual
  • Disease-Free Survival
  • Female
  • Gene Regulatory Networks
  • Humans
  • Interleukin-8 / genetics
  • Interleukin-8 / metabolism
  • Kaplan-Meier Estimate
  • Prognosis
  • RNA, Messenger / metabolism
  • Tumor Microenvironment

Substances

  • Chemokine CXCL9
  • Chemokines, CXC
  • Interleukin-8
  • RNA, Messenger