Bacillus spongiae sp. nov., isolated from sponge of Jeju Island

J Microbiol. 2018 Apr;56(4):217-222. doi: 10.1007/s12275-018-7511-y. Epub 2018 Feb 28.

Abstract

A Gram-reaction-positive, strictly aerobic, motile, endospore- forming, and rod-shaped bacterial strain designated 135PIL107-10T was isolated from a sponge on Jeju Island, and its taxonomic position was investigated using a polyphasic approach. Strain 135PIL107-10T grew at 20-37°C (optimum temperature, 25°C) and pH 6.0-10.0 (optimum pH, 6.0) on marine and R2A agars. Based on 16S rRNA gene phylogeny analysis, the novel strain formed a new branch within the genus Bacillus of the family Bacillaceae, and formed clusters with Bacillus thaohiensis NHI-38T (96.8%), Bacillus fengqiuensis NPK15T (96.7%), and Bacillus songklensis CAU 1033T (96.7%). Lower sequence similarities (97.0%) were found with the type strains of all other recognized members of the genus Bacillus (95.6-96.8% similarity). The G + C content of the genomic DNA was 43.6 mol%. The predominant respiratory quinone was menaquinone-7 and the major fatty acids were iso-C15:0 and iso-C17:1ω10c. The overall polar lipid patterns were diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine. The diagnostic diamino acid in the cell-wall peptidoglycan was meso-diaminopimelic acid. The isolate therefore represents a novel species, for which the name Bacillus spongiae sp. nov. is proposed, with the type strain 135PIL107-10T (= KACC 19275T = LMG 30080T).

Keywords: 16S rRNA gene; Bacillus spongiae; polyphasic taxonomy; sponge.

MeSH terms

  • Animals
  • Bacillus / chemistry
  • Bacillus / classification
  • Bacillus / genetics*
  • Bacillus / isolation & purification*
  • Bacterial Typing Techniques
  • Base Composition
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • Diaminopimelic Acid / analysis
  • Fatty Acids / analysis
  • Fatty Acids / chemistry
  • Genome, Bacterial / genetics
  • Islands
  • Peptidoglycan / chemistry
  • Phenotype
  • Phospholipids / analysis
  • Phylogeny
  • Porifera / microbiology*
  • RNA, Ribosomal, 16S / genetics
  • Republic of Korea
  • Seawater
  • Sequence Analysis, DNA

Substances

  • DNA, Bacterial
  • Fatty Acids
  • Peptidoglycan
  • Phospholipids
  • RNA, Ribosomal, 16S
  • Diaminopimelic Acid