Adhaeribacter swui sp. nov., isolated from wet mud

Int J Syst Evol Microbiol. 2018 Apr;68(4):1096-1100. doi: 10.1099/ijsem.0.002631. Epub 2018 Feb 12.

Abstract

Strain 17mud1-7T, a pink, aerobic, catalase-positive, oxidase-positive and Gram-reaction-negative bacterium, was isolated from wet mud. The isolate grew aerobically at 18-37 °C (optimum 28 °C), at pH 6.0-8.0 (optimum pH 7.0) and in the presence of 0-1 % (w/v) NaCl (optimum 0 % NaCl). Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain 17mud1-7T belonged to the genus Adhaeribacter with highest sequence similarity of 96.4 % to Adhaeribacter aerophilus 6424S-25T. The strain showed the typical chemotaxonomic characteristics of the genus Adhaeribacter, with the presence of menaquinone MK-7 as the respiratory quinone, and summed feature 4 (composed of iso-C17 : 1 I/anteiso-C17 : 1 B), iso-C15 : 0 and C16 : 1ω5c as the major fatty acids are. The polar lipid profile contained two aminophosphoglycolipids, two glycolipids and three unidentified lipids. The DNA G+C content of strain 17mud1-7T was 45.9 mol%. Strain 17mud1-7T should thus be classified as representing a novel species in the genus Adhaeribacter, for which the name Adhaeribacter swui sp. nov. is proposed. The type strain is 17mud1-7T (=KCTC 52873T=NBRC 112824T).

Keywords: Adhaeribacter; mud; novel species; polyphasic analysis.

MeSH terms

  • Bacterial Typing Techniques
  • Bacteroidetes / classification*
  • Bacteroidetes / genetics
  • Bacteroidetes / isolation & purification
  • Base Composition
  • DNA, Bacterial / genetics
  • Fatty Acids / chemistry
  • Glycolipids / chemistry
  • Phylogeny*
  • Pigmentation
  • RNA, Ribosomal, 16S / genetics
  • Republic of Korea
  • Sequence Analysis, DNA
  • Soil Microbiology*
  • Vitamin K 2 / analogs & derivatives
  • Vitamin K 2 / chemistry

Substances

  • DNA, Bacterial
  • Fatty Acids
  • Glycolipids
  • RNA, Ribosomal, 16S
  • Vitamin K 2
  • menaquinone 7