De novo transcriptome assembly and analysis of differential gene expression following peptidoglycan (PGN) challenge in Antheraea pernyi

Int J Biol Macromol. 2018 Jun:112:1199-1207. doi: 10.1016/j.ijbiomac.2018.02.085. Epub 2018 Feb 15.

Abstract

Antheraea pernyi is not only an important economic insect, it is increasingly employed as a model organism due to a variety of advantages, including ease of rearing and experimental manipulation compared with other Lepidoptera. Peptidoglycan (PGN) is a major component of the bacterial cell wall, and interactions between PGN and A. pernyi cause a series of physiological changes in the insect. In the present study, we constructed cDNA libraries from a A. pernyi PGN-infected group and a control group stimulated with phosphate-buffered saline (PBS). The transcriptome was de novo assembled using the Trinity platform, and 1698 differentially expressed genes (DEGs) were identified, comprising 894 up-regulated and 804 down-regulated genes. To further investigate immune-related DEGs, gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment were performed. GO analysis identified major immune-related GO terms and KEGG enrichment indicated gene responses to three pathways related to the insect immune system. Several homologous genes related to the immune response of the A. pernyi fat body post-PGN infection were identified and categorised. Taken together, the results provide insight into the complex molecular mechanisms of the responses to bacterial infection at the transcriptional level.

Keywords: Antheraea pernyi; Peptidoglycan; Transcriptome.

MeSH terms

  • Animals
  • Base Sequence
  • Gene Expression Profiling*
  • Gene Expression Regulation / drug effects*
  • Gene Ontology
  • Immunity / drug effects
  • Immunity / genetics
  • Molecular Sequence Annotation
  • Moths / drug effects
  • Moths / genetics*
  • Moths / immunology
  • Peptidoglycan / pharmacology*
  • Transcriptome / genetics*

Substances

  • Peptidoglycan