Characterisation of ail-positive Yersinia enterocolitica of different biotypes using HRMA

Int J Food Microbiol. 2018 Mar 23:269:46-51. doi: 10.1016/j.ijfoodmicro.2018.01.016. Epub 2018 Feb 2.

Abstract

Yersiniosis is one of the four most frequent foodborne zoonotic diseases in Europe, and Yersinia enterocolitica is the primary agent in human infections. The ail gene is an important chromosomal virulence marker of Y. enterocolitica which encodes Ail, a 17-kDa outer membrane protein that promotes attachment and invasion. In the present study, ail-positive Y. enterocolitica strains of different biotypes were examined using high resolution melting analysis (HRMA) and DNA sequencing. Genotype data relating to Y. enterocolitica strains isolated from different sources and belonging to different biotypes were compared. Applied method allowed efficient distinguishing of three genotypes and phylogenetic groups: 1A - included non-pathogenic Y. enterocolitica strains; 1B - consisted of highly pathogenic Y. enterocolitica strains and 2/4 - involved weakly pathogenic Y. enterocolitica strains. Amplicon genotyping based on HRMA supports rapid identification of ail SNPs correlated with biotype of examined Y. enterocolitica strains.

Keywords: Biotype; Genotypes; High resolution melting analysis; Single nucleotide polymorphism; Yersinia enterocolitica; ail gene.

MeSH terms

  • Animals
  • Bacterial Outer Membrane Proteins / genetics*
  • Base Sequence
  • Europe
  • Foodborne Diseases / microbiology*
  • Genotype
  • Humans
  • Nucleic Acid Denaturation / genetics
  • Phylogeny
  • Polymorphism, Single Nucleotide / genetics*
  • Sequence Analysis, DNA
  • Virulence / genetics
  • Virulence Factors / genetics
  • Yersinia Infections / microbiology*
  • Yersinia enterocolitica / classification*
  • Yersinia enterocolitica / genetics*
  • Yersinia enterocolitica / isolation & purification

Substances

  • Ail protein, Yersinia enterocolitica
  • Bacterial Outer Membrane Proteins
  • Virulence Factors