Metabolic modelling and flux analysis of microorganisms from the Atacama Desert used in biotechnological processes

Antonie Van Leeuwenhoek. 2018 Aug;111(8):1479-1491. doi: 10.1007/s10482-018-1031-y. Epub 2018 Feb 2.

Abstract

Metabolic modelling is a useful tool that enables the rational design of metabolic engineering experiments and the study of the unique capabilities of biotechnologically important microorganisms. The extreme abiotic conditions of the Atacama Desert have selected microbial diversity with exceptional characteristics that can be applied in the mining industry for bioleaching processes and for production of specialised metabolites with antimicrobial, antifungal, antiviral, antitumoral, among other activities. In this review we summarise the scientific data available of the use of metabolic modelling and flux analysis to improve the performance of Atacama Desert microorganisms in biotechnological applications.

Keywords: Actinobacteria; Atacama Desert; Bioleaching microorganisms; Flux balance analysis; Metabolic flux analysis; Metabolic modelling; Specialised metabolites.

Publication types

  • Review

MeSH terms

  • Bacteria / classification
  • Bacteria / metabolism*
  • Biotechnology*
  • Chile
  • Desert Climate
  • Genome, Bacterial / genetics
  • Metabolic Flux Analysis*
  • Metabolic Networks and Pathways*
  • Metabolomics
  • Models, Biological*
  • Soil Microbiology*