Carbamates as Potential Prodrugs and a New Warhead for HDAC Inhibition

Molecules. 2018 Feb 2;23(2):321. doi: 10.3390/molecules23020321.

Abstract

We designed and synthesized carbamates of the clinically-approved HDAC (histone deacetylase) inhibitor vorinostat (suberoylanilide hydroxamic acid, SAHA) in order to validate our previously-proposed hypothesis that these carbamates might serve as prodrugs for hydroxamic acid containing HDAC inhibitors. Biochemical assays proved our new compounds to be potent inhibitors of histone deacetylases in vitro, and they also showed antiproliferative effects in leukemic cells. These results, as well as stability analysis led to the suggestion that the intact carbamates are inhibitors of histone deacetylases themselves, representing a new zinc-binding warhead in HDAC inhibitor design. This suggestion was further supported by the synthesis and evaluation of a carbamate derivative of the HDAC6-selective inhibitor bufexamac.

Keywords: HDACs; epigenetics; histone deacetylases; hydroxamic acids; prodrug concept.

MeSH terms

  • Acetylation / drug effects
  • Amino Acid Motifs
  • Antineoplastic Agents / chemical synthesis
  • Antineoplastic Agents / pharmacology
  • Bufexamac / chemistry
  • Bufexamac / pharmacology
  • Carbamates / chemical synthesis*
  • Carbamates / pharmacology
  • Epigenesis, Genetic
  • HL-60 Cells
  • Histone Deacetylase Inhibitors / chemical synthesis*
  • Histone Deacetylase Inhibitors / pharmacology
  • Histone Deacetylases / genetics
  • Histone Deacetylases / metabolism*
  • Histones / genetics
  • Histones / metabolism
  • Humans
  • Hydroxamic Acids / chemical synthesis*
  • Hydroxamic Acids / pharmacology
  • Molecular Docking Simulation
  • Prodrugs / chemical synthesis*
  • Prodrugs / pharmacology
  • Structure-Activity Relationship
  • U937 Cells
  • Vorinostat
  • Zinc / chemistry

Substances

  • Antineoplastic Agents
  • Carbamates
  • Histone Deacetylase Inhibitors
  • Histones
  • Hydroxamic Acids
  • Prodrugs
  • Bufexamac
  • Vorinostat
  • Histone Deacetylases
  • Zinc