Myopia in Chinese families shows linkage to 10q26.13

Mol Vis. 2018 Jan 14:24:29-42. eCollection 2018.

Abstract

Purpose: To determine genetic linkage between myopia and Han Chinese patients with a family history of the disease.

Methods: One hundred seventy-six Han Chinese patients from 34 extended families were given eye examinations, and mean spherical equivalent (MSE) in diopters (D) was calculated by adding the spherical component of the refraction to one-half the cylindrical component and taking the average of both eyes. The MSE was converted to a binary phenotype, where all patients with an MSE of -1.00 D or less were coded as affected. Unaffected individuals had an MSE greater than 0.00 D (ages 21 years and up), +1.50 (ages 11-20), or +2.00 D (ages 6-10 years). Individuals between the given upper threshold and -1.00 were coded as unknown. Patients were genotyped on an exome chip. Three types of linkage analyses were performed: single-variant two-point, multipoint, and collapsed haplotype pattern (CHP) variant two-point.

Results: The CHP variant two-point results identified a significant peak (heterogeneity logarithm of the odds [HLOD] = 3.73) at 10q26.13 in TACC2. The single-variant two-point and multipoint analyses showed highly suggestive linkage to the same region. The single-variant two-point results identified 25 suggestive variants at HTRA1, also at 10q26.13.

Conclusions: We report a significant genetic linkage between myopia and Han Chinese patients at 10q26.13. 10q26.13 contains several good candidate genes, such as TACC2 and the known age-related macular degeneration gene HTRA1. Targeted sequencing of the region is planned to identify the causal variant(s).

Publication types

  • Observational Study
  • Research Support, N.I.H., Extramural
  • Research Support, N.I.H., Intramural

MeSH terms

  • Adult
  • Aged
  • Asian People
  • Carrier Proteins / genetics
  • Child
  • Chromosomes, Human, Pair 10 / chemistry*
  • Family
  • Female
  • Genetic Linkage*
  • Genetic Loci*
  • Genetic Predisposition to Disease*
  • Haplotypes
  • High-Temperature Requirement A Serine Peptidase 1 / genetics
  • Humans
  • Male
  • Myopia / diagnosis
  • Myopia / ethnology
  • Myopia / genetics*
  • Myopia / pathology
  • Retrospective Studies
  • Tumor Suppressor Proteins / genetics

Substances

  • Carrier Proteins
  • TACC2 protein, human
  • Tumor Suppressor Proteins
  • High-Temperature Requirement A Serine Peptidase 1
  • HTRA1 protein, human