Inducer-independent production of pectinases in Aspergillus niger by overexpression of the D-galacturonic acid-responsive transcription factor gaaR

Appl Microbiol Biotechnol. 2018 Mar;102(6):2723-2736. doi: 10.1007/s00253-018-8753-7. Epub 2018 Jan 24.

Abstract

The transcription factor GaaR is needed for the expression of genes required for pectin degradation and transport and catabolism of the main degradation product, D-galacturonic acid (GA) in Aspergillus niger. In this study, we used the strong constitutive gpdA promoter of Aspergillus nidulans to overexpress gaaR in A. niger. Overexpression of gaaR resulted in an increased transcription of the genes encoding pectinases, (putative) GA transporters, and catabolic pathway enzymes even under non-inducing conditions, i.e., in the absence of GA. Exoproteome analysis of a strain overexpressing gaaR showed that this strain secretes highly elevated levels of pectinases when grown in fructose. The genes encoding exo-polygalacturonases were found to be subjected to CreA-mediated carbon catabolite repression, even in the presence of fructose. Deletion of creA in the strain overexpressing gaaR resulted in a further increase in pectinase production in fructose. We showed that GaaR localizes mainly in the nucleus regardless of the presence of an inducer, and that overexpression of gaaR leads to an increased concentration of GaaR in the nucleus.

Keywords: Exoproteome; GFP fluorescence; Gene regulation; Transcription factor concentration; Transcription factor localization; Transcriptome.

MeSH terms

  • Aspergillus niger / enzymology*
  • Aspergillus niger / genetics
  • Fructose / metabolism
  • Gene Expression Regulation, Fungal*
  • Hexuronic Acids / metabolism
  • Metabolic Engineering / methods*
  • Polygalacturonase / biosynthesis*
  • Polygalacturonase / genetics
  • Promoter Regions, Genetic
  • Transcription Factors / genetics
  • Transcription Factors / metabolism*

Substances

  • Hexuronic Acids
  • Transcription Factors
  • Fructose
  • galacturonic acid
  • Polygalacturonase

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