Conformational stabilization of a β-hairpin through a triazole-tryptophan interaction

Org Biomol Chem. 2018 Jan 31;16(5):787-795. doi: 10.1039/c7ob02815f.

Abstract

Molecular tools to stabilize the β-hairpin conformation are needed as β-hairpin peptides are useful molecules for pharmaceutical, biological and materials applications. We explored the use of a "triazole bridge", a covalent link between two β-hairpin strands obtained through Cu-catalyzed alkyne-azide cycloaddition, combined with an aromatic-aromatic interaction. Highly conformationally stable peptides were identified by NMR screening of a small collection of cyclic peptides based on the Trpzip2 scaffold. The characteristic Trp-Trp interaction of Trpzip2 was replaced by a diagonal triazole bridge of variable length. NMR and CD analyses showed that triazole and indole rings could favorably interact to stabilize a β-hairpin conformation. The conformational stabilization depends on the length of the triazole bridge and the reciprocal position between the aromatic rings. Combining aromatic interactions and the covalent inter-strand triazole bridge is a useful strategy to obtain peptides with a high β-hairpin content.

MeSH terms

  • Amino Acid Sequence
  • Catalysis
  • Copper / chemistry
  • Cycloaddition Reaction
  • Peptides / chemical synthesis
  • Peptides / chemistry*
  • Peptides, Cyclic / chemical synthesis
  • Peptides, Cyclic / chemistry
  • Protein Conformation, beta-Strand
  • Protein Stability
  • Thermodynamics
  • Triazoles / chemical synthesis
  • Triazoles / chemistry*
  • Tryptophan / chemical synthesis
  • Tryptophan / chemistry*

Substances

  • Peptides
  • Peptides, Cyclic
  • Triazoles
  • Copper
  • Tryptophan