Binding Mode and Structure-Activity Relationships of ITE as an Aryl Hydrocarbon Receptor (AhR) Agonist

ChemMedChem. 2018 Feb 6;13(3):270-279. doi: 10.1002/cmdc.201700669. Epub 2018 Jan 23.

Abstract

Discovered as a modulator of the toxic response to environmental pollutants, aryl hydrocarbon receptor (AhR) has recently gained attention for its involvement in various physiological and pathological pathways. AhR is a ligand-dependent transcription factor activated by a large array of chemical compounds, which include metabolites of l-tryptophan (l-Trp) catabolism as endogenous ligands of the receptor. Among these, 2-(1'H-indole-3'-carbonyl)thiazole-4-carboxylic acid methyl ester (ITE) has attracted interest in the scientific community, being endowed with nontoxic, immunomodulatory, and anticancer AhR-mediated functions. So far, no information about the binding mode and interactions of ITE with AhR is available. In this study, we used docking and molecular dynamics to propose a putative binding mode of ITE into the ligand binding pocket of AhR. Mutagenesis studies were then instrumental in validating the proposed binding mode, identifying His 285 and Tyr 316 as important key residues for ligand-dependent receptor activation. Finally, a set of ITE analogues was synthesized and tested to further probe molecular interactions of ITE to AhR and characterize the relevance of specific functional groups in the chemical structure for receptor activity.

Keywords: AhR; ITE; cancer; immunotherapy; tryptophan.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Antineoplastic Agents / chemical synthesis
  • Antineoplastic Agents / pharmacology
  • Cell Line, Tumor
  • Fibroblasts / cytology
  • Fibroblasts / drug effects
  • Histidine / genetics
  • Humans
  • Immunosuppressive Agents / chemical synthesis
  • Immunosuppressive Agents / pharmacology
  • Indoles / chemical synthesis*
  • Indoles / pharmacology
  • Ligands
  • Mice
  • Mice, Inbred C57BL
  • Molecular Docking Simulation
  • Molecular Dynamics Simulation
  • Mutagenicity Tests
  • Protein Binding
  • Receptors, Aryl Hydrocarbon / agonists*
  • Receptors, Aryl Hydrocarbon / genetics
  • Structure-Activity Relationship
  • Thiazoles / chemical synthesis*
  • Thiazoles / pharmacology
  • Tryptophan / genetics

Substances

  • 2-(1'H-indole-3'-carbonyl)thiazole-4-carboxylic acid methyl ester
  • Antineoplastic Agents
  • Immunosuppressive Agents
  • Indoles
  • Ligands
  • Receptors, Aryl Hydrocarbon
  • Thiazoles
  • Histidine
  • Tryptophan