Recruitment of UvrBC complexes to UV-induced damage in the absence of UvrA increases cell survival

Nucleic Acids Res. 2018 Feb 16;46(3):1256-1265. doi: 10.1093/nar/gkx1244.

Abstract

Nucleotide excision repair (NER) is the primary mechanism for removal of ultraviolet light (UV)-induced DNA photoproducts and is mechanistically conserved across all kingdoms of life. Bacterial NER involves damage recognition by UvrA2 and UvrB, followed by UvrC-mediated incision either side of the lesion. Here, using a combination of in vitro and in vivo single-molecule studies we show that a UvrBC complex is capable of lesion identification in the absence of UvrA. Single-molecule analysis of eGFP-labelled UvrB and UvrC in living cells showed that UV damage caused these proteins to switch from cytoplasmic diffusion to stable complexes on DNA. Surprisingly, ectopic expression of UvrC in a uvrA deleted strain increased UV survival. These data provide evidence for a previously unrealized mechanism of survival that can occur through direct lesion recognition by a UvrBC complex.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphatases / deficiency
  • Adenosine Triphosphatases / genetics*
  • Bacillus / chemistry
  • Bacillus / genetics
  • Bacillus / metabolism
  • DNA Damage
  • DNA Helicases / genetics*
  • DNA Helicases / metabolism
  • DNA Repair*
  • DNA, Bacterial / genetics*
  • DNA, Bacterial / metabolism
  • DNA-Binding Proteins / deficiency
  • DNA-Binding Proteins / genetics*
  • Endodeoxyribonucleases / genetics*
  • Endodeoxyribonucleases / metabolism
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Escherichia coli / radiation effects*
  • Escherichia coli Proteins / genetics*
  • Escherichia coli Proteins / metabolism
  • Gene Deletion
  • Gene Expression Regulation, Bacterial
  • Genes, Reporter
  • Green Fluorescent Proteins / genetics
  • Green Fluorescent Proteins / metabolism
  • Microbial Viability / genetics
  • Microbial Viability / radiation effects
  • Protein Binding
  • Single Molecule Imaging / methods
  • Ultraviolet Rays

Substances

  • DNA, Bacterial
  • DNA-Binding Proteins
  • Escherichia coli Proteins
  • UvrB protein, E coli
  • enhanced green fluorescent protein
  • Green Fluorescent Proteins
  • Endodeoxyribonucleases
  • UvrC protein, E coli
  • UvrA protein, E coli
  • Adenosine Triphosphatases
  • DNA Helicases