Structural Insights into the Thermophilic Adaption Mechanism of Endo-1,4-β-Xylanase from Caldicellulosiruptor owensensis

J Agric Food Chem. 2018 Jan 10;66(1):187-193. doi: 10.1021/acs.jafc.7b03607. Epub 2017 Dec 27.

Abstract

Xylanases (EC 3.2.1.8) are a kind of enzymes degrading xylan to xylooligosaccharides (XOS) and have been widely used in a variety of industrial applications. Among them, xylanases from thermophilic microorganisms have distinct advantages in industries that require high temperature conditions. The CoXynA gene, encoding a glycoside hydrolase (GH) family 10 xylanase, was identified from thermophilic Caldicellulosiruptor owensensis and was overexpressed in Escherichia coli. Recombinant CoXynA showed optimal activity at 90 °C with a half-life of about 1 h at 80 °C and exhibited highest activity at pH 7.0. The activity of CoXynA activity was affected by a variety of cations. CoXynA showed distinct substrate specificities for beechwood xylan and birchwood xylan. The crystal structure of CoXynA was solved and a molecular dynamics simulation of CoXynA was performed. The relatively high thermostability of CoXynA was proposed to be due to the increased overall protein rigidity resulting from the reduced length and fluctuation of Loop 7.

Keywords: Caldicellulosiruptor owensensis; GH10 xylanase; Loop 7; crystal structure; thermostability.

MeSH terms

  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Betula / chemistry
  • Crystallography, X-Ray
  • Endo-1,4-beta Xylanases / chemistry*
  • Endo-1,4-beta Xylanases / genetics
  • Endo-1,4-beta Xylanases / metabolism*
  • Enzyme Stability
  • Escherichia coli / genetics
  • Fagus / chemistry
  • Firmicutes / enzymology*
  • Hydrogen-Ion Concentration
  • Kinetics
  • Molecular Dynamics Simulation
  • Protein Conformation
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Substrate Specificity
  • Wood / chemistry
  • Xylans / metabolism

Substances

  • Bacterial Proteins
  • Recombinant Proteins
  • Xylans
  • Endo-1,4-beta Xylanases