Bootstrap-based procedures for inference in nonparametric receiver-operating characteristic curve regression analysis

Stat Methods Med Res. 2018 Mar;27(3):740-764. doi: 10.1177/0962280217742542. Epub 2017 Dec 12.

Abstract

Prior to using a diagnostic test in a routine clinical setting, the rigorous evaluation of its diagnostic accuracy is essential. The receiver-operating characteristic curve is the measure of accuracy most widely used for continuous diagnostic tests. However, the possible impact of extra information about the patient (or even the environment) on diagnostic accuracy also needs to be assessed. In this paper, we focus on an estimator for the covariate-specific receiver-operating characteristic curve based on direct regression modelling and nonparametric smoothing techniques. This approach defines the class of generalised additive models for the receiver-operating characteristic curve. The main aim of the paper is to offer new inferential procedures for testing the effect of covariates on the conditional receiver-operating characteristic curve within the above-mentioned class. Specifically, two different bootstrap-based tests are suggested to check (a) the possible effect of continuous covariates on the receiver-operating characteristic curve and (b) the presence of factor-by-curve interaction terms. The validity of the proposed bootstrap-based procedures is supported by simulations. To facilitate the application of these new procedures in practice, an R-package, known as npROCRegression, is provided and briefly described. Finally, data derived from a computer-aided diagnostic system for the automatic detection of tumour masses in breast cancer is analysed.

Keywords: Receiver-operating characteristic curve; bootstrap; computer-aided diagnosis; generalised additive models.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms
  • Area Under Curve
  • Biomarkers
  • Biostatistics / methods
  • Breast Neoplasms / diagnostic imaging
  • Computer Simulation
  • Diagnosis, Computer-Assisted / statistics & numerical data
  • Diagnostic Tests, Routine / statistics & numerical data
  • Female
  • Humans
  • Mammography / statistics & numerical data
  • Models, Statistical
  • Multivariate Analysis
  • ROC Curve*
  • Regression Analysis*
  • Software
  • Statistics, Nonparametric*

Substances

  • Biomarkers