A Distal Loop Controls Product Release and Chemo- and Regioselectivity in Cytochrome P450 Decarboxylases

Biochemistry. 2018 Jan 23;57(3):344-353. doi: 10.1021/acs.biochem.7b01065. Epub 2017 Dec 19.

Abstract

Cytochrome P450 OleT utilizes hydrogen peroxide (H2O2) to catalyze the decarboxylation or hydroxylation of fatty acid (FA) substrates. Both reactions are initiated through the abstraction of a substrate hydrogen atom by the high-valent iron-oxo intermediate known as Compound I. Here, we specifically probe the influence of substrate coordination on OleT reaction partitioning through the combined use of fluorescent and electron paramagnetic resonance (EPR)-active FA probes and mutagenesis of a structurally disordered F-G loop that is distal from the heme-iron active site. Both probes are efficiently metabolized by OleT and efficiently trigger the formation of Compound I. Transient fluorescence and EPR reveal a slow product release step, mediated by the F-G loop, that limits OleT turnover. A single-amino acid change or excision of the loop reveals that this region establishes critical interactions to anchor FA substrates in place. The stabilization afforded by the F-G loop is essential for regulating regiospecific C-H abstraction and allowing for efficient decarboxylation to occur. These results highlight a regulatory strategy whereby the fate of activated oxygen species can be controlled at distances far removed from the site of chemistry.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Base Sequence
  • Carboxy-Lyases / chemistry
  • Carboxy-Lyases / genetics
  • Carboxy-Lyases / metabolism*
  • Cytochrome P-450 Enzyme System / chemistry
  • Cytochrome P-450 Enzyme System / genetics
  • Cytochrome P-450 Enzyme System / metabolism*
  • Decarboxylation
  • Electron Spin Resonance Spectroscopy
  • Fatty Acids / metabolism
  • Fluorescence Resonance Energy Transfer
  • Fluorescent Dyes
  • Hydrogen Peroxide / metabolism
  • Hydroxylation
  • Mutagenesis, Site-Directed
  • Protein Conformation
  • Spectrophotometry, Ultraviolet
  • Substrate Specificity

Substances

  • Fatty Acids
  • Fluorescent Dyes
  • Cytochrome P-450 Enzyme System
  • Hydrogen Peroxide
  • Carboxy-Lyases