Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community

Surya Saha; Prashant S Hosmani; Krystal Villalobos-Ayala; Sherry Miller; Teresa Shippy; Mirella Flores; Andrew Rosendale; Chris Cordola; Tracey Bell; Hannah Mann; Gabe DeAvila; Daniel DeAvila; Zachary Moore; Kyle Buller; Kathryn Ciolkevich; Samantha Nandyal; Robert Mahoney; Joshua Van Voorhis; Megan Dunlevy; David Farrow; David Hunter; Taylar Morgan; Kayla Shore; Victoria Guzman; Allison Izsak; Danielle E Dixon; Andrew Cridge; Liliana Cano; Xiaolong Cao; Haobo Jiang; Nan Leng; Shannon Johnson; Brandi L Cantarel; Stephen Richards; Adam English; Robert G Shatters; Chris Childers; Mei-Ju Chen; Wayne Hunter; Michelle Cilia; Lukas A Mueller; Monica Munoz-Torres; David Nelson; Monica F Poelchau; Joshua B Benoit; Helen Wiersma-Koch; Tom D'Elia; Susan J Brown

doi:10.1093/database/bax032

Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community

Database (Oxford). 2017 Jan 1:2017:bax032. doi: 10.1093/database/bax032.

Authors

Surya Saha¹, Prashant S Hosmani¹, Krystal Villalobos-Ayala², Sherry Miller³, Teresa Shippy³, Mirella Flores¹, Andrew Rosendale⁴, Chris Cordola², Tracey Bell², Hannah Mann², Gabe DeAvila², Daniel DeAvila², Zachary Moore⁴, Kyle Buller⁴, Kathryn Ciolkevich⁴, Samantha Nandyal⁴, Robert Mahoney⁴, Joshua Van Voorhis⁴, Megan Dunlevy⁴, David Farrow⁴, David Hunter³, Taylar Morgan³, Kayla Shore³, Victoria Guzman³, Allison Izsak⁵, Danielle E Dixon^{1

6}, Andrew Cridge⁷, Liliana Cano⁷, Xiaolong Cao⁸, Haobo Jiang⁹, Nan Leng¹⁰, Shannon Johnson¹¹, Brandi L Cantarel¹², Stephen Richards^{13

14}, Adam English^{13

14}, Robert G Shatters¹⁵, Chris Childers¹⁵, Mei-Ju Chen¹⁶, Wayne Hunter¹⁷, Michelle Cilia^{18

19}, Lukas A Mueller^{1

20}, Monica Munoz-Torres²¹, David Nelson²², Monica F Poelchau¹⁵, Joshua B Benoit⁴, Helen Wiersma-Koch², Tom D'Elia², Susan J Brown³

Affiliations

¹ Boyce Thompson Institute, Ithaca, NY 14853.
² Indian River State College, Fort Pierce, FL 34981.
³ Division of Biology, Kansas State University, Manhattan, KS 66506.
⁴ University of Cincinnati, Cincinnati, OH 45220.
⁵ Cornell University, Ithaca, NY 14853.
⁶ University of Puget Sound, Tacoma, WA 98416, USA.
⁷ University of Otago, North Dunedin, Dunedin 9016, New Zealand.
⁸ i5K Arthropod Genomics.
⁹ Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030.
¹⁰ Department of Bioinformatics, UT Southwestern Medical Center, Bioinformatics Core Facility, Dallas, TX 75390.
¹¹ Department of Biochemistry and Molecular Biology.
¹² Department of Entomology and Plant Pathology, Oklahoma State University, Stillwater, OK 74074.
¹³ Illumina Inc., San Diego, CA 92122.
¹⁴ Los Alamos National Laboratory, Los Alamos, NM 87544.
¹⁵ USDA ARS, U.S. Horticultural Research Laboratory, Ft. Pierce, FL 34945.
¹⁶ USDA Agricultural Research Service, National Agricultural Library, Beltsville, MD 20705, USA.
¹⁷ Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei 10617, Taiwan.
¹⁸ USDA ARS, Emerging Pests and Pathogens Research Unit, Ithaca, NY 14853.
¹⁹ Plant Pathology and Plant-Microbe Biology Section.
²⁰ Plant Breeding and Genetics Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853.
²¹ Lawrence Berkeley National Laboratory, Environmental Genomics and Systems Biology, Berkeley, CA 94720.
²² Department of Microbiology, Immunology and Biochemistry, The University of Tennessee Health Science Center, Memphis, TN 38163, USA.

Abstract

https://citrusgreening.org/.

Publication types

Research Support, N.I.H., Extramural
Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

Animals
Citrus / microbiology
Citrus / parasitology
Databases, Genetic*
Genome, Insect / genetics*
Hemiptera* / genetics
Hemiptera* / microbiology
Insect Vectors / genetics*
Pest Control*
Plant Diseases*
Rhizobiaceae

Grants and funding

P20 RR016469/RR/NCRR NIH HHS/United States