Quantitative Proteomic Study Reveals Up-Regulation of cAMP Signaling Pathway-Related Proteins in Mild Traumatic Brain Injury

J Proteome Res. 2018 Feb 2;17(2):858-869. doi: 10.1021/acs.jproteome.7b00618. Epub 2017 Dec 27.

Abstract

Traumatic brain injury (TBI), as a neurological injury, becomes a leading cause of disability and mortality due to lacking effective therapy. About 75% of TBI is mild traumatic brain injury (mTBI). However, the complex molecular mechanisms underlying mTBI pathophysiology remains to be elucidated. In this study, iTRAQ-based quantitative proteomic approach was employed to measure temporal-global proteome changes of rat brain tissues from different time points (1 day, 7 day and 6 months) post single mTBI (smTBI) and repetitive mTBI (rmTBI). A total of 5169 proteins were identified, of which, 237 proteins were significantly changed between control rats and mTBI model rats. Fuzzy c-means (FCM) clustering analysis classified these 237 proteins into six clusters according to their temporal pattern of protein abundance. Functional bioinformatics analysis and protein-protein interaction (PPI) network mapping of these FCM clusters showed that phosphodiesterase 10A (Pde10a) and guanine nucleotide-binding protein G (olf) subunit alpha (Gnal) were the node proteins in the cAMP signaling pathway. Other biological processes, such as cell adhesion, autophagy, myelination, microtubule depolymerization and brain development, were also over-represented in FCM clusters. Further Western Blot experiments confirmed that Pde10a and Gnal were acutely up-regulated in severity-dependent manner by mTBI, but these two proteins could not be down-regulated to basal level at the time point of 6 months post repetitive mTBI. Our study demonstrated that different severity of mTBI cause significant temporal profiling change at the proteomic level and pointed out the cAMP signaling pathway-related proteins, Pde10a and Gnal, may play important roles in the pathogenesis and recovery of mTBI.

Keywords: Gnal; Pde10a; cAMP signal process; iTRAQ; mTBI; proteomic analysis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Brain / metabolism
  • Brain / pathology
  • Brain Injuries, Traumatic / genetics*
  • Brain Injuries, Traumatic / metabolism
  • Brain Injuries, Traumatic / pathology
  • Chromatography, High Pressure Liquid
  • Cluster Analysis
  • Computational Biology / methods
  • Cyclic AMP / metabolism*
  • Disease Models, Animal
  • GTP-Binding Protein alpha Subunits / genetics*
  • GTP-Binding Protein alpha Subunits / metabolism
  • Gene Expression Regulation
  • Male
  • Nerve Tissue Proteins / genetics
  • Nerve Tissue Proteins / isolation & purification*
  • Nerve Tissue Proteins / metabolism
  • Phosphoric Diester Hydrolases / genetics*
  • Phosphoric Diester Hydrolases / metabolism
  • Protein Interaction Mapping
  • Proteolysis
  • Proteome / genetics
  • Proteome / isolation & purification*
  • Proteome / metabolism
  • Proteomics / methods
  • Rats
  • Rats, Sprague-Dawley
  • Signal Transduction
  • Staining and Labeling / methods
  • Trauma Severity Indices

Substances

  • GTP-Binding Protein alpha Subunits
  • Nerve Tissue Proteins
  • Proteome
  • olfactory G protein subunit alpha olf
  • Cyclic AMP
  • PDE10A protein, rat
  • Phosphoric Diester Hydrolases