Capturing Early Changes in the Marine Bacterial Community as a Result of Crude Oil Pollution in a Mesocosm Experiment

Microbes Environ. 2017 Dec 27;32(4):358-366. doi: 10.1264/jsme2.ME17082. Epub 2017 Nov 28.

Abstract

The results of marine bacterial community succession from a short-term study of seawater incubations at 4°C to North Sea crude oil are presented herein. Oil was used alone (O) or in combination with a dispersant (OD). Marine bacterial communities resulting from these incubations were characterized by a fingerprinting analysis and pyrosequencing of the 16S rRNA gene with the aim of 1) revealing differences in bacterial communities between the control, O treatment, and OD treatment and 2) identifying the operational taxonomic units (OTUs) of early responders in order to define the bacterial gene markers of oil pollution for in situ monitoring.After an incubation for 1 d, the distribution of the individual ribotypes of bacterial communities in control and oil-treated (O and OD) tanks differed. Differences related to the structures of bacterial communities were observed at later stages of the incubation. Among the early responders identified (Pseudoalteromonas, Sulfitobacter, Vibrio, Pseudomonas, Glaciecola, Neptunomonas, Methylophaga, and Pseudofulvibacter), genera that utilize a disintegrated biomass or hydrocarbons as well as biosurfactant producers were detected. None of these genera included obligate hydrocarbonoclastic bacteria (OHCB). After an incubation for 1 d, the abundances of Glaciecola and Pseudofulvibacter were approximately 30-fold higher in the OD and O tanks than in the control tank. OTUs assigned to the Glaciecola genus were represented more in the OD tank, while those of Pseudofulvibacter were represented more in the O tank. We also found that 2 to 3% of the structural community shift originated from the bacterial community in the oil itself, with Polaribacter being a dominant bacterium.

Keywords: crude oil; environmental monitoring; microbial communities; molecular markers; rapid responders.

MeSH terms

  • Aquatic Organisms / classification*
  • Bacteria / classification*
  • Bacteria / genetics
  • Bacteria / metabolism*
  • Base Sequence
  • Biodegradation, Environmental
  • DNA, Bacterial / genetics
  • Environmental Monitoring
  • Hydrocarbons / analysis
  • Hydrocarbons / metabolism*
  • North Sea
  • Petroleum / analysis
  • Petroleum / metabolism*
  • Petroleum Pollution / analysis*
  • RNA, Ribosomal, 16S / genetics
  • Seawater / microbiology
  • Sequence Analysis, DNA
  • Water Pollutants, Chemical / analysis
  • Water Pollutants, Chemical / metabolism*

Substances

  • DNA, Bacterial
  • Hydrocarbons
  • Petroleum
  • RNA, Ribosomal, 16S
  • Water Pollutants, Chemical