Bacillus amyloliquefaciens ssp. plantarum F11 isolated from Algerian salty lake as a source of biosurfactants and bioactive lipopeptides

FEMS Microbiol Lett. 2018 Jan 1;365(1). doi: 10.1093/femsle/fnx248.

Abstract

In this study, we identified a new Bacillus strain isolated from an Algerian salty lake that produces metabolites that are active against Gram-positive and Gram-negative bacteria, as well as fungal pathogens. The draft genome sequence of the strain is presented herein. Genome sequence analysis identified the strain to be B. amyloliquefaciens subspecies plantarum F11, and showed that the strain carries the gene clusters for the production of a number of bioactive and surface-active compounds. These include the lipopeptides surfactin and fengycin, antibacterial polyketides macrolactin and bacillaene, and a putative novel lanthipeptide, among others. Through an activity-guided purification method using hydrophobic interaction chromatographic techniques, we confirmed the ability of the strain to produce fengycin lipopeptides. The identities of the isolated fengycin homologs were ascertained through tandem mass spectrometry.

Keywords: Bacillus amyloliquefaciens; antimicrobial; biosurfactants; comparative genomics; lipopeptides; next-generation sequencing.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algeria
  • Anti-Bacterial Agents / isolation & purification
  • Anti-Bacterial Agents / pharmacology
  • Antifungal Agents / isolation & purification
  • Antifungal Agents / pharmacology
  • Bacillus amyloliquefaciens / chemistry*
  • Bacillus amyloliquefaciens / classification
  • Comparative Genomic Hybridization
  • Genome, Bacterial
  • Lakes / microbiology*
  • Lipopeptides / chemistry
  • Lipopeptides / isolation & purification*
  • Microbial Sensitivity Tests
  • Polyenes / chemistry
  • Polyenes / isolation & purification
  • Polyketides / chemistry
  • Polyketides / isolation & purification
  • Saline Waters
  • Surface-Active Agents / chemistry
  • Surface-Active Agents / isolation & purification*

Substances

  • Anti-Bacterial Agents
  • Antifungal Agents
  • Lipopeptides
  • Polyenes
  • Polyketides
  • Surface-Active Agents
  • bacillaene
  • fengycin