Mixture drug-count response model for the high-dimensional drug combinatory effect on myopathy

Stat Med. 2018 Feb 20;37(4):673-686. doi: 10.1002/sim.7545. Epub 2017 Nov 23.

Abstract

Drug-drug interactions (DDIs) are a common cause of adverse drug events (ADEs). The electronic medical record (EMR) database and the FDA's adverse event reporting system (FAERS) database are the major data sources for mining and testing the ADE associated DDI signals. Most DDI data mining methods focus on pair-wise drug interactions, and methods to detect high-dimensional DDIs in medical databases are lacking. In this paper, we propose 2 novel mixture drug-count response models for detecting high-dimensional drug combinations that induce myopathy. The "count" indicates the number of drugs in a combination. One model is called fixed probability mixture drug-count response model with a maximum risk threshold (FMDRM-MRT). The other model is called count-dependent probability mixture drug-count response model with a maximum risk threshold (CMDRM-MRT), in which the mixture probability is count dependent. Compared with the previous mixture drug-count response model (MDRM) developed by our group, these 2 new models show a better likelihood in detecting high-dimensional drug combinatory effects on myopathy. CMDRM-MRT identified and validated (54; 374; 637; 442; 131) 2-way to 6-way drug interactions, respectively, which induce myopathy in both EMR and FAERS databases. We further demonstrate FAERS data capture much higher maximum myopathy risk than EMR data do. The consistency of 2 mixture models' parameters and local false discovery rate estimates are evaluated through statistical simulation studies.

Keywords: FDA's adverse event reporting system; drug-count response model; electronic medical record; high-dimensional drug interactions; myopathy.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Adverse Drug Reaction Reporting Systems / statistics & numerical data
  • Algorithms
  • Biostatistics
  • Computer Simulation
  • Data Mining
  • Databases, Factual / statistics & numerical data
  • Drug Interactions*
  • Drug Therapy, Combination / adverse effects*
  • Drug-Related Side Effects and Adverse Reactions*
  • Electronic Health Records / statistics & numerical data
  • Humans
  • Likelihood Functions
  • Models, Biological
  • Models, Statistical*
  • Muscular Diseases / chemically induced*
  • Risk Factors
  • United States
  • United States Food and Drug Administration