Crystal structure of NucB, a biofilm-degrading endonuclease

Nucleic Acids Res. 2018 Jan 9;46(1):473-484. doi: 10.1093/nar/gkx1170.

Abstract

Bacterial biofilms are a complex architecture of cells that grow on moist interfaces, and are held together by a molecular glue of extracellular proteins, sugars and nucleic acids. Biofilms are particularly problematic in human healthcare as they can coat medical implants and are thus a potential source of disease. The enzymatic dispersal of biofilms is increasingly being developed as a new strategy to treat this problem. Here, we have characterized NucB, a biofilm-dispersing nuclease from a marine strain of Bacillus licheniformis, and present its crystal structure together with the biochemistry and a mutational analysis required to confirm its active site. Taken together, these data support the categorization of NucB into a unique subfamily of the ββα metal-dependent non-specific endonucleases. Understanding the structure and function of NucB will facilitate its future development into an anti-biofilm therapeutic agent.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacillus licheniformis / genetics
  • Bacillus licheniformis / metabolism
  • Bacillus licheniformis / physiology*
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Biofilms / growth & development*
  • Crystallography, X-Ray
  • DNA / genetics
  • DNA / metabolism
  • Deoxyribonucleases / chemistry*
  • Deoxyribonucleases / genetics
  • Deoxyribonucleases / metabolism
  • Models, Molecular
  • Protein Conformation

Substances

  • Bacterial Proteins
  • DNA
  • Deoxyribonucleases
  • NucB protein, Bacillus licheniformis