Bacteriophage Taxonomy: An Evolving Discipline

Methods Mol Biol. 2018:1693:57-71. doi: 10.1007/978-1-4939-7395-8_6.

Abstract

While taxonomy is an often-unappreciated branch of science it serves very important roles. Bacteriophage taxonomy has evolved from a mainly morphology-based discipline, characterized by the work of David Bradley and Hans-Wolfgang Ackermann, to the holistic approach that is taken today. The Bacterial and Archaeal Viruses Subcommittee of the International Committee on Taxonomy of Viruses (ICTV) takes a comprehensive approach to classifying prokaryote viruses measuring overall DNA and protein identity and phylogeny before making decisions about the taxonomic position of a new virus. The huge number of complete genomes being deposited with NCBI and other public databases has resulted in a reassessment of the taxonomy of many viruses, and the future will see the introduction of new viral families and higher orders.

Keywords: DNA sequence homology; ICTV; Morphology; NCBI; Taxonomy.

Publication types

  • Research Support, N.I.H., Intramural

MeSH terms

  • Bacteriophages / classification*
  • Classification / methods*
  • Phylogeny
  • Terminology as Topic*