Mass spectrometry characterization of endophytic bacterium Curtobacterium sp. strain ER1/6 isolated from Citrus sinensis

J Mass Spectrom. 2018 Jan;53(1):91-97. doi: 10.1002/jms.4042.

Abstract

The bacteria of the genus Curtobacterium are usually seen as plant pathogen, but some species have been identified as endophytes of different crops and could as such present a potential for disease control and plant growth promotion. We have therefore applied the desorption electrospray ionization mass spectrometry imaging (DESI-MSI) in the direct analysis of living Curtobacterium sp. strain ER1/6 colonies to map the surface metabolites, and electrospray ionization tandem mass spectrometry (ESI-MS/MS) for characterization of these compounds. Several colony-associated metabolites were detected. The ESI-MS/MS showed characteristic fragmentations for phospholipids including the classes of glycerophosphocholine, glycerophosphoglycerol, and glycerophosphoinositol as well as several fatty acids. Although a secure identification was not obtained, many other metabolites were also detected for this bacteria species. Principal component analysis showed that fatty acids were discriminatory for Curtobacterium sp. ER1/6 during inoculation on periwinkle wilt (PW) medium, whereas phospholipids characterize the bacterium when grown on the tryptic soy agar (TSA) medium.

Keywords: Curtobacterium sp. ER1/6; desorption electrospray ionization; endophytic bacterium; mass spectrometry imaging; phospholipids.

MeSH terms

  • Actinobacteria / isolation & purification*
  • Chromatography, High Pressure Liquid
  • Citrus sinensis / microbiology*
  • Endophytes / chemistry*
  • Phospholipids / chemistry
  • Tandem Mass Spectrometry

Substances

  • Phospholipids