Formation of the chaperonin complex studied by 2D NMR spectroscopy

PLoS One. 2017 Oct 23;12(10):e0187022. doi: 10.1371/journal.pone.0187022. eCollection 2017.

Abstract

We studied the interaction between GroES and a single-ring mutant (SR1) of GroEL by the NMR titration of 15N-labeled GroES with SR1 at three different temperatures (20, 25 and 30°C) in the presence of 3 mM ADP in 100 mM KCl and 10 mM MgCl2 at pH 7.5. We used SR1 instead of wild-type double-ring GroEL to precisely control the stoichiometry of the GroES binding to be 1:1 ([SR1]:[GroES]). Native heptameric GroES was very flexible, showing well resolved cross peaks of the residues in a mobile loop segment (residue 17-34) and at the top of a roof hairpin (Asn51) in the heteronuclear single quantum coherence spectra. The binding of SR1 to GroES caused the cross peaks to disappear simultaneously, and hence it occurred in a single-step cooperative manner with significant immobilization of the whole GroES structure. The binding was thus entropic with a positive entropy change (219 J/mol/K) and a positive enthalpy change (35 kJ/mol), and the binding constant was estimated at 1.9×105 M-1 at 25°C. The NMR titration in 3 mM ATP also indicated that the binding constant between GroES and SR1 increased more than tenfold as compared with the binding constant in 3 mM ADP. These results will be discussed in relation to the structure and mechanisms of the chaperonin GroEL/GroES complex.

MeSH terms

  • Chaperonins / chemistry*
  • Magnetic Resonance Spectroscopy / methods*
  • Protein Conformation
  • Thermodynamics

Substances

  • Chaperonins

Grants and funding

This study was supported by MEXT (the Ministry of Education, Culture, Sports, Science and Technology of Japan) KAKENHI Grant Numbers JP20107009, JP25102001 and JP25102008, by the Nanotechnology Platform Program (Molecule and Material Synthesis) of MEXT, by JSPS (Japan Society for the Promotion of Science) KAKENHI Grant Numbers JP25440075 and JP16K07314, by Research Center of Integrative Molecular Systems of the Institute for Molecular Science, and by the Okazaki ORION project of the Okazaki Institute for Integrative Bioscience. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.