High-Quality Whole-Genome Sequences of the Oligo-Mouse-Microbiota Bacterial Community

Debora Garzetti; Sandrine Brugiroux; Boyke Bunk; Rüdiger Pukall; Kathy D McCoy; Andrew J Macpherson; Bärbel Stecher

doi:10.1128/genomeA.00758-17

High-Quality Whole-Genome Sequences of the Oligo-Mouse-Microbiota Bacterial Community

Genome Announc. 2017 Oct 19;5(42):e00758-17. doi: 10.1128/genomeA.00758-17.

Authors

Debora Garzetti^{1

2}, Sandrine Brugiroux³, Boyke Bunk⁴, Rüdiger Pukall⁴, Kathy D McCoy⁵, Andrew J Macpherson⁵, Bärbel Stecher^{3

2}

Affiliations

¹ Max von Pettenkofer Institute of Hygiene and Medical Microbiology, Ludwig-Maximilians-University of Munich, Munich, Germany garzetti@mvp.uni-muenchen.de.
² German Center for Infection Research (DZIF), Partner Site Munich, Munich, Germany.
³ Max von Pettenkofer Institute of Hygiene and Medical Microbiology, Ludwig-Maximilians-University of Munich, Munich, Germany.
⁴ Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
⁵ Maurice Müller Laboratories, Department of Clinical Research (DKF), UVCM, University Hospital, Bern, Switzerland.

Abstract

The Oligo-Mouse-Microbiota (Oligo-MM¹²) is a community of 12 mouse intestinal bacteria to be used for microbiome research in gnotobiotic mice. We present here the high-quality whole genome sequences of the Oligo-MM¹² strains, which were obtained by combining the accuracy of the Illumina platforms with the long reads of the PacBio technology.