Metagenomics: novel enzymes from non-culturable microbes

FEMS Microbiol Lett. 2017 Nov 15;364(21). doi: 10.1093/femsle/fnx211.

Abstract

In the transition to the post-petroleum economy, there is a growing demand for novel enzymes with high process performances to replace traditional chemistry with a more 'green' approach. To date, microorganisms encompass the richest source of industrial biocatalysts, but the Earth-living microbiota remains largely untapped by using traditional isolation and cultivation methods. Metagenomics, which is culture independent, represents a powerful tool for discovering novel enzymes from unculturable microorganisms. Herein, we summarize the variety of approaches adopted for mining environmental DNA and, based on a systematic literature review, we provide a comprehensive list of 332 industrially relevant enzymes discovered from metagenomes within the last three years.

Keywords: environmental libraries; heterologous expression; industrial enzymes; metagenomics; screening.

Publication types

  • Review
  • Systematic Review

MeSH terms

  • Bacteria / enzymology*
  • Bacterial Proteins* / chemistry
  • Bacterial Proteins* / classification
  • Bacterial Proteins* / genetics
  • Biocatalysis
  • Environmental Microbiology
  • Enzymes* / chemistry
  • Enzymes* / classification
  • Enzymes* / genetics
  • Industrial Microbiology
  • Metagenomics / methods*
  • Microbiota*

Substances

  • Bacterial Proteins
  • Enzymes