CRISPR/Cas9-mediated noncoding RNA editing in human cancers

RNA Biol. 2018 Jan 2;15(1):35-43. doi: 10.1080/15476286.2017.1391443. Epub 2017 Nov 9.

Abstract

Cancer is characterized by multiple genetic and epigenetic alterations, including a higher prevalence of mutations of oncogenes and/or tumor suppressors. Mounting evidences have shown that noncoding RNAs (ncRNAs) are involved in the epigenetic regulation of cancer genes and their associated pathways. The clustered regularly interspaced short palindromic repeats (CRISPR)-associated nuclease 9 (CRISPR/Cas9) system, a revolutionary genome-editing technology, has shed light on ncRNA-based cancer therapy. Here, we briefly introduce the classifications and mechanisms of CRISPR/Cas9 system. Importantly, we mainly focused on the applications of CRISPR/Cas9 system as a molecular tool for ncRNA (microRNA, long noncoding RNA and circular RNA, etc.) editing in human cancers, and the novel techniques that are based on CRISPR/Cas9 system. Additionally, the off-target effects and the corresponding solutions as well as the challenges toward CRISPR/Cas9 were also evaluated and discussed. Long- and short-ncRNAs have been employed as targets in precision oncology, and CRISPR/Cas9-mediated ncRNA editing may provide an excellent way to cure cancer.

Keywords: CRISPR-Cas9; RNA editing; cancer; circular RNA; genome editing; long noncoding RNA; microRNA.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • CRISPR-Cas Systems / genetics*
  • Endonucleases / genetics
  • Genetic Therapy
  • Humans
  • MicroRNAs / genetics*
  • Neoplasms / genetics
  • RNA / genetics*
  • RNA Editing / genetics
  • RNA, Circular
  • RNA, Untranslated / genetics*

Substances

  • MicroRNAs
  • RNA, Circular
  • RNA, Untranslated
  • RNA
  • Endonucleases

Grants and funding

This work was supported by research grants from the Natural Science Foundation of Zhejiang (LY15C060003, LQ18H200001), the Non-profit Technology Research Program of Zhejiang (LGF18H160006), the Natural Science Foundation of Ningbo (2017A610247), the Scientific Innovation Team Project of Ningbo (2017C110019), the National Undergraduate Training Program for Innovation and Entrepreneurship (201711646018) and the K.C.Wong Magna Fund at Ningbo University.