Conducting electrospun fibres with polyanionic grafts as highly selective, label-free, electrochemical biosensor with a low detection limit for non-Hodgkin lymphoma gene

Biosens Bioelectron. 2018 Feb 15:100:549-555. doi: 10.1016/j.bios.2017.09.042. Epub 2017 Sep 28.

Abstract

A highly selective, label-free sensor for the non-Hodgkin lymphoma gene, with an aM detection limit, utilizing electrochemical impedance spectroscopy (EIS) is presented. The sensor consists of a conducting electrospun fibre mat, surface-grafted with poly(acrylic acid) (PAA) brushes and a conducting polymer sensing element with covalently attached oligonucleotide probes. The sensor was fabricated from electrospun NBR rubber, embedded with poly(3,4-ethylenedioxythiophene) (PEDOT), followed by grafting poly(acrylic acid) brushes and then electrochemically polymerizing a conducting polymer monomer with ssDNA probe sequence pre-attached. The resulting non-Hodgkin lymphoma gene sensor showed a detection limit of 1aM (1 × 10-18mol/L), more than 400 folds lower compared to a thin-film analogue. The sensor presented extraordinary selectivity, with only 1%, 2.7% and 4.6% of the signal recorded for the fully non-complimentary, T-A and G-C base mismatch oligonucleotide sequences, respectively. We suggest that such greatly enhanced selectivity is due to the presence of negatively charged carboxylic acid moieties from PAA grafts that electrostatically repel the non-complementary and mismatch DNA sequences, overcoming the non-specific binding.

Keywords: DNA sensor; Electrospinning; Enhanced selectivity; Surface grafting.

MeSH terms

  • Acrylic Resins / chemistry*
  • Base Pair Mismatch
  • Biosensing Techniques / methods*
  • Bridged Bicyclo Compounds, Heterocyclic / chemistry*
  • DNA / analysis*
  • DNA / genetics
  • Humans
  • Lymphoma, Non-Hodgkin / diagnosis
  • Lymphoma, Non-Hodgkin / genetics*
  • Polyelectrolytes
  • Polymers / chemistry*
  • Porosity

Substances

  • Acrylic Resins
  • Bridged Bicyclo Compounds, Heterocyclic
  • Polyelectrolytes
  • Polymers
  • poly(3,4-ethylene dioxythiophene)
  • polyanions
  • carbopol 940
  • DNA