Complete chloroplast genome and 45S nrDNA sequences of the medicinal plant species Glycyrrhiza glabra and Glycyrrhiza uralensis

Genes Genet Syst. 2018 Oct 30;93(3):83-89. doi: 10.1266/ggs.17-00002. Epub 2017 Oct 6.

Abstract

Glycyrrhiza uralensis and G. glabra, members of the Fabaceae, are medicinally important species that are native to Asia and Europe. Extracts from these plants are widely used as natural sweeteners because of their much greater sweetness than sucrose. In this study, the three complete chloroplast genomes and five 45S nuclear ribosomal (nr)DNA sequences of these two licorice species and an interspecific hybrid are presented. The chloroplast genomes of G. glabra, G. uralensis and G. glabra × G. uralensis were 127,895 bp, 127,716 bp and 127,939 bp, respectively. The three chloroplast genomes harbored 110 annotated genes, including 76 protein-coding genes, 30 tRNA genes and 4 rRNA genes. The 45S nrDNA sequences were either 5,947 or 5,948 bp in length. Glycyrrhiza glabra and G. glabra × G. uralensis showed two types of nrDNA, while G. uralensis contained a single type. The complete 45S nrDNA sequence unit contains 18S rRNA, ITS1, 5.8S rRNA, ITS2 and 26S rRNA. We identified simple sequence repeat and tandem repeat sequences. We also developed four reliable markers for analysis of Glycyrrhiza diversity authentication.

Keywords: 45S nrDNA; Glycyrrhiza species; chloroplast; medicinal plant.

MeSH terms

  • Asia
  • DNA, Plant / genetics
  • DNA, Ribosomal / genetics
  • Genome, Chloroplast / genetics
  • Glycyrrhiza / genetics*
  • Glycyrrhiza uralensis / genetics*
  • Phylogeny
  • Plants, Medicinal / genetics

Substances

  • DNA, Plant
  • DNA, Ribosomal