Genotypes of human metapneumovirus circulating during 2010-2012 in children from Panama

J Med Virol. 2018 Mar;90(3):604-608. doi: 10.1002/jmv.24969. Epub 2017 Nov 1.

Abstract

Human metapneumovirus (HMPV) is a common causative agent of severe respiratory tract infections in children under 5 years old, the elderly and immunocompromised patients, being responsible for 5-15% of all viral respiratory infections requiring hospitalization. Though HMPV was included in the surveillance program for respiratory viruses in 2010, its genotype distribution remains unknown. Herein, 45 positive samples to HMPV from children ≤5 years old were characterized by phylogenetic analysis based on N gene sequence. Results showed the co-circulation of four sub-lineages: A2a (8.8%), A2b (55.5%), B1 (15.6%), and B2 (20%), demonstrating the genetic heterogeneity of HMPV circulating in Panamá.

Keywords: acute respiratory infections (ARI); genotype; human metapneumovirus; nucleoprotein.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Child, Preschool
  • Genetic Variation*
  • Genotype
  • Hospitalization
  • Humans
  • Infant
  • Metapneumovirus / genetics*
  • Nasopharynx / virology
  • Panama / epidemiology
  • Paramyxoviridae Infections / epidemiology*
  • Paramyxoviridae Infections / virology
  • Phylogeny
  • RNA, Viral / genetics
  • Respiratory Tract Infections / epidemiology
  • Respiratory Tract Infections / virology
  • Sequence Analysis, DNA

Substances

  • RNA, Viral