Surface properties of SAR11 bacteria facilitate grazing avoidance

Nat Microbiol. 2017 Dec;2(12):1608-1615. doi: 10.1038/s41564-017-0030-5. Epub 2017 Oct 2.

Abstract

Oceanic ecosystems are dominated by minute microorganisms that play a major role in food webs and biogeochemical cycles 1 . Many microorganisms thrive in the dilute environment due to their capacity to locate, attach to, and use patches of nutrients and organic matter 2,3 . We propose that some free-living planktonic bacteria have traded their ability to stick to nutrient-rich organic particles for a non-stick cell surface that helps them evade predation by mucous filter feeders. We used a combination of in situ sampling techniques and next-generation sequencing to study the biological filtration of microorganisms at the phylotype level. Our data indicate that some marine bacteria, most notably the highly abundant Pelagibacter ubique and most other members of the SAR 11 clade of the Alphaproteobacteria, can evade filtration by slipping through the mucous nets of both pelagic and benthic tunicates. While 0.3 µm polystyrene beads and other similarly-sized bacteria were efficiently filtered, SAR11 members were not captured. Reversed-phase chromatography revealed that most SAR11 bacteria have a much less hydrophobic cell surface than that of other planktonic bacteria. Our data call for a reconsideration of the role of surface properties in biological filtration and predator-prey interactions in aquatic systems.

MeSH terms

  • Alphaproteobacteria / classification
  • Alphaproteobacteria / genetics
  • Alphaproteobacteria / metabolism*
  • Aquatic Organisms / metabolism
  • Bacteria
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism*
  • Cell Surface Extensions* / genetics
  • Cell Surface Extensions* / metabolism
  • Food Chain
  • France
  • Hydrophobic and Hydrophilic Interactions*
  • Mediterranean Sea
  • Oceans and Seas
  • Polystyrenes / chemistry
  • RNA, Ribosomal, 16S / genetics
  • Seawater / microbiology*
  • Surface Properties

Substances

  • Bacterial Proteins
  • Polystyrenes
  • RNA, Ribosomal, 16S