The Roles of the SNARE Protein Sed5 in Autophagy in Saccharomyces cerevisiae

Mol Cells. 2017 Sep 30;40(9):643-654. doi: 10.14348/molcells.2017.0030. Epub 2017 Sep 20.

Abstract

Autophagy is a degradation pathway in eukaryotic cells in which aging proteins and organelles are sequestered into double-membrane vesicles, termed autophagosomes, which fuse with vacuoles to hydrolyze cargo. The key step in autophagy is the formation of autophagosomes, which requires different kinds of vesicles, including COPII vesicles and Atg9-containing vesicles, to transport lipid double-membranes to the phagophore assembly site (PAS). In yeast, the cis-Golgi localized t-SNARE protein Sed5 plays a role in endoplasmic reticulum (ER)-Golgi and intra-Golgi vesicular transport. We report that during autophagy, sed5-1 mutant cells could not properly transport Atg8 to the PAS, resulting in multiple Atg8 dots being dispersed into the cytoplasm. Some dots were trapped in the Golgi apparatus. Sed5 regulates the antero-grade trafficking of Atg9-containing vesicles to the PAS by participating in the localization of Atg23 and Atg27 to the Golgi apparatus. Furthermore, we found that overexpression of SFT1 or SFT2 (suppressor of sed5 ts) rescued the autophagy defects in sed5-1 mutant cells. Our data suggest that Sed5 plays a novel role in autophagy, by regulating the formation of Atg9-containing vesicles in the Golgi apparatus, and the genetic interaction between Sft1/2 and Sed5 is essential for autophagy.

Keywords: Atg9-containing vesicles; Sed5; Sft1/2; autophagy; golgi apparatus.

MeSH terms

  • Autophagosomes / metabolism
  • Autophagy / genetics*
  • Autophagy-Related Proteins / genetics*
  • Autophagy-Related Proteins / metabolism
  • COP-Coated Vesicles / genetics
  • COP-Coated Vesicles / metabolism
  • Endoplasmic Reticulum / genetics
  • Endoplasmic Reticulum / metabolism
  • Gene Expression Regulation, Fungal / genetics
  • Membrane Proteins / genetics*
  • Protein Binding
  • Protein Transport / genetics*
  • Qa-SNARE Proteins / genetics*
  • Qc-SNARE Proteins / genetics
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae Proteins / genetics*
  • Vesicular Transport Proteins / genetics

Substances

  • ATG9 protein, S cerevisiae
  • Autophagy-Related Proteins
  • Membrane Proteins
  • Qa-SNARE Proteins
  • Qc-SNARE Proteins
  • SFT1 protein, S cerevisiae
  • Saccharomyces cerevisiae Proteins
  • Sed5 protein, S cerevisiae
  • Sft2 protein, S cerevisiae
  • Vesicular Transport Proteins